find . -name "*.py" | xargs perl -pi -e 's/[ \t]*$//'
Reverting test_docparse
git checkout nipype/utils/tests/test_docparse.py
building docs
make -C doc clean html
rm -rf _build/* *~ api/generated interfaces/generated users/examples documentation.zip
mkdir -p users/examples
../tools/make_examples.py --no-exec
examples2rst finished.
rm -rf api/generated
python ../tools/build_modref_templates.py
('WARNING: Empty -', 'nipype.caching')
('WARNING: Empty -', 'nipype.interfaces')
('WARNING: Empty -', 'nipype.pipeline')
4 files written
rm -rf interfaces/generated
python ../tools/build_interface_docs.py
121117-19:30:49,17 workflow DEBUG:
	 networkx 1.4 dev or higher detected
Installed version: 0.7.0.gb101a53-dev
Current stable version: 0.6.0
Current dev version: 0.7.0.g47cdfdb-dev
WARNING: Empty - nipype
WARNING: Empty - nipype.algorithms
ICC
AddCSVColumn
CreateNifti
Distance
Gunzip
Matlab2CSV
MergeCSVFiles
ModifyAffine
Overlap
PickAtlas
SimpleThreshold
TSNR
SpecifyModel
SpecifySPMModel
SpecifySparseModel
SpecifySparseSPMModel
'SpecifySparseSPMModel'
ArtifactDetect
StimulusCorrelation
WARNING: Empty - nipype.info
WARNING: Empty - nipype.interfaces
WARNING: Empty - nipype.interfaces.afni
WARNING: Empty - nipype.interfaces.afni.base
Allineate
Automask
BrickStat
Calc
Copy
Despike
Detrend
Fim
Fourier
Maskave
Merge
ROIStats
Refit
Resample
SkullStrip
TCat
TCorrelate
TShift
TStat
To3D
Volreg
Warp
ZCutUp
WARNING: Empty - nipype.interfaces.ants
WARNING: Empty - nipype.interfaces.ants.base
GenWarpFields
antsIntroduction
buildtemplateparallel
Registration
ApplyTransforms
WarpImageMultiTransform
WarpTimeSeriesImageMultiTransform
Atropos
N4BiasFieldCorrection
AverageAffineTransform
AverageImages
MultiplyImages
WARNING: Empty - nipype.interfaces.camino
Conmap
AnalyzeHeader
DT2NIfTI
Image2Voxel
NIfTIDT2Camino
ProcStreamlines
TractShredder
VtkStreamlines
ComputeEigensystem
ComputeFractionalAnisotropy
ComputeMeanDiffusivity
ComputeTensorTrace
DTIFit
DTLUTGen
ModelFit
PicoPDFs
Track
TrackBallStick
TrackBayesDirac
TrackBootstrap
TrackDT
TrackPICo
WARNING: Empty - nipype.interfaces.camino2trackvis
Camino2Trackvis
Trackvis2Camino
WARNING: Empty - nipype.interfaces.cmtk
CreateMatrix
CreateNodes
ROIGen
CFFConverter
MergeCNetworks
NetworkBasedStatistic
AverageNetworks
NetworkXMetrics
Parcellate
Dcm2nii
WARNING: Empty - nipype.interfaces.diffusion_toolkit
WARNING: Empty - nipype.interfaces.diffusion_toolkit.base
DTIRecon
DTITracker
HARDIMat
ODFRecon
ODFTracker
SplineFilter
WARNING: Empty - nipype.interfaces.dipy
TrackDensityMap
SlicerCommandLine
WARNING: Empty - nipype.interfaces.freesurfer
WARNING: Empty - nipype.interfaces.freesurfer.base
Binarize
Concatenate
GLMFit
Label2Vol
MRISPreproc
MS_LDA
OneSampleTTest
SegStats
ApplyVolTransform
BBRegister
DICOMConvert
FitMSParams
MRIConvert
ParseDICOMDir
ReconAll
Resample
RobustRegister
Smooth
SynthesizeFLASH
UnpackSDICOMDir
ApplyMask
MRIMarchingCubes
MRITessellate
MRIsConvert
MakeAverageSubject
SampleToSurface
SmoothTessellation
SurfaceSmooth
SurfaceSnapshots
SurfaceTransform
WARNING: Empty - nipype.interfaces.fsl
WARNING: Empty - nipype.interfaces.fsl.base
BEDPOSTX
DTIFit
DistanceMap
EddyCorrect
FindTheBiggest
MakeDyadicVectors
ProbTrackX
ProjThresh
TractSkeleton
VecReg
XFibres
ApplyMask
ApplyMaskInput
BinaryMaths
BinaryMathsInput
ChangeDataType
ChangeDataTypeInput
DilateImage
DilateInput
ErodeImage
ErodeInput
IsotropicSmooth
IsotropicSmoothInput
KernelInput
MathsCommand
MathsInput
MathsOutput
MeanImage
MeanImageInput
MultiImageMaths
MultiImageMathsInput
SpatialFilter
SpatialFilterInput
TemporalFilter
TemporalFilterInput
Threshold
UnaryMaths
UnaryMathsInput
Cluster
ContrastMgr
FEAT
FEATModel
FEATRegister
FILMGLS
FLAMEO
L2Model
Level1Design
MELODIC
MultipleRegressDesign
Randomise
SMM
SmoothEstimate
ApplyWarp
ApplyXfm
BET
FAST
FIRST
FLIRT
FNIRT
FUGUE
MCFLIRT
PRELUDE
SUSAN
SliceTimer
AvScale
ConvertXFM
EPIDeWarp
ExtractROI
FilterRegressor
ImageMaths
ImageMeants
ImageStats
Merge
Overlay
PlotMotionParams
PlotTimeSeries
PowerSpectrum
Reorient2Std
Slicer
Smooth
Split
SwapDimensions
DataGrabber
DataSink
FreeSurferSource
IOBase
MySQLSink
SQLiteSink
XNATSink
XNATSource
MeshFix
WARNING: Empty - nipype.interfaces.mne
WatershedBEM
WARNING: Empty - nipype.interfaces.mrtrix
MRTrix2TrackVis
DWI2Tensor
Erode
GenerateWhiteMatterMask
MRConvert
MRMultiply
MRTransform
MRTrixViewer
MedianFilter3D
Tensor2ApparentDiffusion
Tensor2FractionalAnisotropy
Tensor2Vector
Threshold
ConstrainedSphericalDeconvolution
DWI2SphericalHarmonicsImage
EstimateResponseForSH
DiffusionTensorStreamlineTrack
ProbabilisticSphericallyDeconvolutedStreamlineTrack
SphericallyDeconvolutedStreamlineTrack
StreamlineTrack
Tracks2Prob
WARNING: Empty - nipype.interfaces.nipy
EstimateContrast
FitGLM
ComputeMask
FmriRealign4d
Similarity
WARNING: Empty - nipype.interfaces.nitime
CoherenceAnalyzer
GetTimeSeries
WARNING: Empty - nipype.interfaces.slicer
SlicerCommandLine
DicomToNrrdConverter
WARNING: Empty - nipype.interfaces.slicer.diffusion
dwiNoiseFilter
jointLMMSE
extractNrrdVectorIndex
gtractAnisotropyMap
gtractAverageBvalues
gtractClipAnisotropy
gtractCoRegAnatomy
gtractConcatDwi
gtractCopyImageOrientation
gtractCoregBvalues
gtractCostFastMarching
gtractImageConformity
gtractInvertBSplineTransform
gtractInvertDeformationField
gtractInvertRigidTransform
gtractResampleAnisotropy
gtractResampleB0
gtractResampleCodeImage
gtractResampleDWIInPlace
gtractTensor
gtractTransformToDeformationField
DiffusionTensorEstimation
DiffusionTensorMathematics
DiffusionWeightedMasking
ResampleDTI
WARNING: Empty - nipype.interfaces.slicer.filtering
Add
Cast
CheckerBoard
CurvatureAnisotropicDiffusion
WARNING: Empty - nipype.interfaces.slicer.legacy
WARNING: Empty - nipype.interfaces.slicer.legacy.diffusion
dwiUNLM
AffineRegistration
BSplineDeformableRegistration
DiffusionTensorTest
ComputeSUVBodyWeight
BRAINSDemonWarp
BRAINSFit
BRAINSResample
VBRAINSDemonWarp
WARNING: Empty - nipype.interfaces.slicer.segmentation
ConfidenceConnected
BRAINSROIAuto
WARNING: Empty - nipype.interfaces.spm
EstimateContrast
EstimateModel
FactorialDesign
Level1Design
MultipleRegressionDesign
OneSampleTTestDesign
PairedTTestDesign
Threshold
ThresholdStatistics
TwoSampleTTestDesign
ApplyDeformations
Coregister
CreateWarped
DARTEL
DARTELNorm2MNI
NewSegment
Normalize
Realign
Segment
SliceTiming
Smooth
Analyze2nii
ApplyTransform
CalcCoregAffine
Reslice
AssertEqual
Function
IdentityInterface
Merge
Rename
Select
Split
WARNING: Empty - nipype.workflows
WARNING: Empty - nipype.workflows.dmri
WARNING: Empty - nipype.workflows.dmri.camino
121117-19:30:55,835 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): No edge data
121117-19:30:55,835 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,836 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,836 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:55,836 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): No edge data
121117-19:30:55,836 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,837 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,837 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:55,837 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): No edge data
121117-19:30:55,837 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,838 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:55,838 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.inputnode_within, mapping.image2voxel): No edge data
121117-19:30:55,840 workflow DEBUG:
	 (mapping.inputnode_within, mapping.image2voxel): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fsl2scheme): No edge data
121117-19:30:55,840 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fsl2scheme): new edge data: {'connect': [('bvecs', 'bvec_file'), ('bvals', 'bval_file')]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.image2voxel, mapping.dtifit): No edge data
121117-19:30:55,840 workflow DEBUG:
	 (mapping.image2voxel, mapping.dtifit): new edge data: {'connect': [['voxel_order', 'in_file']]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.fsl2scheme, mapping.dtifit): No edge data
121117-19:30:55,840 workflow DEBUG:
	 (mapping.fsl2scheme, mapping.dtifit): new edge data: {'connect': [['scheme', 'scheme_file']]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_Brain): No edge data
121117-19:30:55,840 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_Brain): new edge data: {'connect': [('brain', 'in_file')]}
121117-19:30:55,840 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLH): No edge data
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLH): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRH): No edge data
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRH): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHwhite): No edge data
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHwhite): new edge data: {'connect': [('white', 'in_file')]}
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHwhite): No edge data
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHwhite): new edge data: {'connect': [('white', 'in_file')]}
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHinflated): No edge data
121117-19:30:55,841 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHinflated): new edge data: {'connect': [('inflated', 'in_file')]}
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHinflated): No edge data
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHinflated): new edge data: {'connect': [('inflated', 'in_file')]}
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHsphere): No edge data
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHsphere): new edge data: {'connect': [('sphere', 'in_file')]}
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHsphere): No edge data
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHsphere): new edge data: {'connect': [('sphere', 'in_file')]}
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): No edge data
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): No edge data
121117-19:30:55,842 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:55,843 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): Edge data exists: {'connect': [('pial', 'in_file')]}
121117-19:30:55,843 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): new edge data: {'connect': [('pial', 'in_file'), (('annot', 'S"def select_aparc_annot(list_of_files):\\n    for in_file in list_of_files:\\n        if \'.aparc.annot\' in in_file:\\n            idx = list_of_files.index(in_file)\\n    return list_of_files[idx]\\n"\n.', ()), 'annot_file')]}
121117-19:30:55,844 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): Edge data exists: {'connect': [('pial', 'in_file')]}
121117-19:30:55,844 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): new edge data: {'connect': [('pial', 'in_file'), (('annot', 'S"def select_aparc_annot(list_of_files):\\n    for in_file in list_of_files:\\n        if \'.aparc.annot\' in in_file:\\n            idx = list_of_files.index(in_file)\\n    return list_of_files[idx]\\n"\n.', ()), 'annot_file')]}
121117-19:30:55,844 workflow DEBUG:
	 (mapping.inputnode_within, mapping.bet_b0): No edge data
121117-19:30:55,845 workflow DEBUG:
	 (mapping.inputnode_within, mapping.bet_b0): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:30:55,845 workflow DEBUG:
	 (mapping.inputnode_within, mapping.bet_b0): Edge data exists: {'connect': [('dwi', 'in_file')]}
121117-19:30:55,845 workflow DEBUG:
	 (mapping.inputnode_within, mapping.bet_b0): new edge data: {'connect': [('dwi', 'in_file'), ('dwi', 't2_guided')]}
121117-19:30:55,846 workflow DEBUG:
	 (mapping.bet_b0, mapping.coregister): No edge data
121117-19:30:55,846 workflow DEBUG:
	 (mapping.bet_b0, mapping.coregister): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:55,846 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.coregister): No edge data
121117-19:30:55,846 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.coregister): new edge data: {'connect': [('out_file', 'reference')]}
121117-19:30:55,846 workflow DEBUG:
	 (mapping.coregister, mapping.convertxfm): No edge data
121117-19:30:55,846 workflow DEBUG:
	 (mapping.coregister, mapping.convertxfm): new edge data: {'connect': [('out_matrix_file', 'in_file')]}
121117-19:30:55,847 workflow DEBUG:
	 (mapping.bet_b0, mapping.inverse): No edge data
121117-19:30:55,847 workflow DEBUG:
	 (mapping.bet_b0, mapping.inverse): new edge data: {'connect': [('out_file', 'reference')]}
121117-19:30:55,847 workflow DEBUG:
	 (mapping.convertxfm, mapping.inverse): No edge data
121117-19:30:55,847 workflow DEBUG:
	 (mapping.convertxfm, mapping.inverse): new edge data: {'connect': [('out_file', 'in_matrix_file')]}
121117-19:30:55,847 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.inverse): No edge data
121117-19:30:55,847 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.inverse): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:55,848 workflow DEBUG:
	 (mapping.bet_b0, mapping.track): No edge data
121117-19:30:55,848 workflow DEBUG:
	 (mapping.bet_b0, mapping.track): new edge data: {'connect': [('mask_file', 'seed_file')]}
121117-19:30:55,848 workflow DEBUG:
	 (mapping.fsl2scheme, mapping.dtlutgen): No edge data
121117-19:30:55,848 workflow DEBUG:
	 (mapping.fsl2scheme, mapping.dtlutgen): new edge data: {'connect': [('scheme', 'scheme_file')]}
121117-19:30:55,848 workflow DEBUG:
	 (mapping.dtlutgen, mapping.picopdfs): No edge data
121117-19:30:55,848 workflow DEBUG:
	 (mapping.dtlutgen, mapping.picopdfs): new edge data: {'connect': [('dtLUT', 'luts')]}
121117-19:30:55,848 workflow DEBUG:
	 (mapping.dtifit, mapping.picopdfs): No edge data
121117-19:30:55,849 workflow DEBUG:
	 (mapping.dtifit, mapping.picopdfs): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:55,849 workflow DEBUG:
	 (mapping.picopdfs, mapping.track): No edge data
121117-19:30:55,849 workflow DEBUG:
	 (mapping.picopdfs, mapping.track): new edge data: {'connect': [('pdfs', 'in_file')]}
121117-19:30:55,849 workflow DEBUG:
	 (mapping.dtifit, mapping.fa): No edge data
121117-19:30:55,849 workflow DEBUG:
	 (mapping.dtifit, mapping.fa): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:55,849 workflow DEBUG:
	 (mapping.fa, mapping.analyzeheader_fa): No edge data
121117-19:30:55,849 workflow DEBUG:
	 (mapping.fa, mapping.analyzeheader_fa): new edge data: {'connect': [('fa', 'in_file')]}
121117-19:30:55,852 workflow DEBUG:
	 (mapping.inputnode_within, mapping.analyzeheader_fa): No edge data
121117-19:30:55,852 workflow DEBUG:
	 (mapping.inputnode_within, mapping.analyzeheader_fa): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:55,852 workflow DEBUG:
	 (mapping.fa, mapping.fa2nii): No edge data
121117-19:30:55,852 workflow DEBUG:
	 (mapping.fa, mapping.fa2nii): new edge data: {'connect': [('fa', 'data_file')]}
121117-19:30:55,853 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fa2nii): No edge data
121117-19:30:55,853 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fa2nii): new edge data: {'connect': [(('dwi', "S'def get_affine(volume):\\n    import nibabel as nb\\n    nii = nb.load(volume)\\n    return nii.get_affine()\\n'\n.", ()), 'affine')]}
121117-19:30:55,853 workflow DEBUG:
	 (mapping.analyzeheader_fa, mapping.fa2nii): No edge data
121117-19:30:55,854 workflow DEBUG:
	 (mapping.analyzeheader_fa, mapping.fa2nii): new edge data: {'connect': [('header', 'header_file')]}
121117-19:30:55,854 workflow DEBUG:
	 (mapping.dtifit, mapping.trace): No edge data
121117-19:30:55,854 workflow DEBUG:
	 (mapping.dtifit, mapping.trace): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:55,854 workflow DEBUG:
	 (mapping.trace, mapping.analyzeheader_trace): No edge data
121117-19:30:55,854 workflow DEBUG:
	 (mapping.trace, mapping.analyzeheader_trace): new edge data: {'connect': [('trace', 'in_file')]}
121117-19:30:55,857 workflow DEBUG:
	 (mapping.inputnode_within, mapping.analyzeheader_trace): No edge data
121117-19:30:55,857 workflow DEBUG:
	 (mapping.inputnode_within, mapping.analyzeheader_trace): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:55,857 workflow DEBUG:
	 (mapping.trace, mapping.trace2nii): No edge data
121117-19:30:55,857 workflow DEBUG:
	 (mapping.trace, mapping.trace2nii): new edge data: {'connect': [('trace', 'data_file')]}
121117-19:30:55,858 workflow DEBUG:
	 (mapping.inputnode_within, mapping.trace2nii): No edge data
121117-19:30:55,858 workflow DEBUG:
	 (mapping.inputnode_within, mapping.trace2nii): new edge data: {'connect': [(('dwi', "S'def get_affine(volume):\\n    import nibabel as nb\\n    nii = nb.load(volume)\\n    return nii.get_affine()\\n'\n.", ()), 'affine')]}
121117-19:30:55,858 workflow DEBUG:
	 (mapping.analyzeheader_trace, mapping.trace2nii): No edge data
121117-19:30:55,858 workflow DEBUG:
	 (mapping.analyzeheader_trace, mapping.trace2nii): new edge data: {'connect': [('header', 'header_file')]}
121117-19:30:55,858 workflow DEBUG:
	 (mapping.dtifit, mapping.dteig): No edge data
121117-19:30:55,858 workflow DEBUG:
	 (mapping.dtifit, mapping.dteig): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:55,859 workflow DEBUG:
	 (mapping.track, mapping.camino2trackvis): No edge data
121117-19:30:55,859 workflow DEBUG:
	 (mapping.track, mapping.camino2trackvis): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:30:55,859 workflow DEBUG:
	 (mapping.track, mapping.vtkstreamlines): No edge data
121117-19:30:55,859 workflow DEBUG:
	 (mapping.track, mapping.vtkstreamlines): new edge data: {'connect': [['tracked', 'in_file']]}
121117-19:30:55,859 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.trk2camino): No edge data
121117-19:30:55,859 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.trk2camino): new edge data: {'connect': [['trackvis', 'in_file']]}
121117-19:30:55,862 workflow DEBUG:
	 (mapping.inputnode_within, mapping.camino2trackvis): No edge data
121117-19:30:55,862 workflow DEBUG:
	 (mapping.inputnode_within, mapping.camino2trackvis): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:55,862 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateNodes): No edge data
121117-19:30:55,862 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateNodes): new edge data: {'connect': [('resolution_network_file', 'resolution_network_file')]}
121117-19:30:55,863 workflow DEBUG:
	 (mapping.CreateNodes, mapping.CreateMatrix): No edge data
121117-19:30:55,863 workflow DEBUG:
	 (mapping.CreateNodes, mapping.CreateMatrix): new edge data: {'connect': [('node_network', 'resolution_network_file')]}
121117-19:30:55,863 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_AparcAseg): No edge data
121117-19:30:55,863 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_AparcAseg): new edge data: {'connect': [(('aparc_aseg', 'S"def select_aparc(list_of_files):\\n    for in_file in list_of_files:\\n        if \'aparc+aseg.mgz\' in in_file:\\n            idx = list_of_files.index(in_file)\\n    return list_of_files[idx]\\n"\n.', ()), 'in_file')]}
121117-19:30:55,864 workflow DEBUG:
	 (mapping.bet_b0, mapping.inverse_AparcAseg): No edge data
121117-19:30:55,864 workflow DEBUG:
	 (mapping.bet_b0, mapping.inverse_AparcAseg): new edge data: {'connect': [('out_file', 'reference')]}
121117-19:30:55,864 workflow DEBUG:
	 (mapping.convertxfm, mapping.inverse_AparcAseg): No edge data
121117-19:30:55,864 workflow DEBUG:
	 (mapping.convertxfm, mapping.inverse_AparcAseg): new edge data: {'connect': [('out_file', 'in_matrix_file')]}
121117-19:30:55,864 workflow DEBUG:
	 (mapping.mri_convert_AparcAseg, mapping.inverse_AparcAseg): No edge data
121117-19:30:55,864 workflow DEBUG:
	 (mapping.mri_convert_AparcAseg, mapping.inverse_AparcAseg): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:55,865 workflow DEBUG:
	 (mapping.mri_convert_AparcAseg, mapping.ROIGen_structspace): No edge data
121117-19:30:55,865 workflow DEBUG:
	 (mapping.mri_convert_AparcAseg, mapping.ROIGen_structspace): new edge data: {'connect': [('out_file', 'aparc_aseg_file')]}
121117-19:30:55,865 workflow DEBUG:
	 (mapping.ROIGen_structspace, mapping.CreateNodes): No edge data
121117-19:30:55,865 workflow DEBUG:
	 (mapping.ROIGen_structspace, mapping.CreateNodes): new edge data: {'connect': [('roi_file', 'roi_file')]}
121117-19:30:55,865 workflow DEBUG:
	 (mapping.inverse_AparcAseg, mapping.ROIGen): No edge data
121117-19:30:55,865 workflow DEBUG:
	 (mapping.inverse_AparcAseg, mapping.ROIGen): new edge data: {'connect': [('out_file', 'aparc_aseg_file')]}
121117-19:30:55,866 workflow DEBUG:
	 (mapping.ROIGen, mapping.CreateMatrix): No edge data
121117-19:30:55,866 workflow DEBUG:
	 (mapping.ROIGen, mapping.CreateMatrix): new edge data: {'connect': [('roi_file', 'roi_file')]}
121117-19:30:55,866 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.CreateMatrix): No edge data
121117-19:30:55,866 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.CreateMatrix): new edge data: {'connect': [('trackvis', 'tract_file')]}
121117-19:30:55,867 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): No edge data
121117-19:30:55,867 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): new edge data: {'connect': [('subject_id', 'out_matrix_file')]}
121117-19:30:55,867 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): Edge data exists: {'connect': [('subject_id', 'out_matrix_file')]}
121117-19:30:55,867 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): new edge data: {'connect': [('subject_id', 'out_matrix_file'), ('subject_id', 'out_matrix_mat_file')]}
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertLH, mapping.GiftiSurfaces): No edge data
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertLH, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in1')]}
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertRH, mapping.GiftiSurfaces): No edge data
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertRH, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in2')]}
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertLHwhite, mapping.GiftiSurfaces): No edge data
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertLHwhite, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in3')]}
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertRHwhite, mapping.GiftiSurfaces): No edge data
121117-19:30:55,868 workflow DEBUG:
	 (mapping.mris_convertRHwhite, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in4')]}
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertLHinflated, mapping.GiftiSurfaces): No edge data
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertLHinflated, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in5')]}
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertRHinflated, mapping.GiftiSurfaces): No edge data
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertRHinflated, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in6')]}
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertLHsphere, mapping.GiftiSurfaces): No edge data
121117-19:30:55,869 workflow DEBUG:
	 (mapping.mris_convertLHsphere, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in7')]}
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertRHsphere, mapping.GiftiSurfaces): No edge data
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertRHsphere, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in8')]}
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertLHlabels, mapping.GiftiLabels): No edge data
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertLHlabels, mapping.GiftiLabels): new edge data: {'connect': [('converted', 'in1')]}
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertRHlabels, mapping.GiftiLabels): No edge data
121117-19:30:55,870 workflow DEBUG:
	 (mapping.mris_convertRHlabels, mapping.GiftiLabels): new edge data: {'connect': [('converted', 'in2')]}
121117-19:30:55,871 workflow DEBUG:
	 (mapping.ROIGen, mapping.NiftiVolumes): No edge data
121117-19:30:55,871 workflow DEBUG:
	 (mapping.ROIGen, mapping.NiftiVolumes): new edge data: {'connect': [('roi_file', 'in1')]}
121117-19:30:55,871 workflow DEBUG:
	 (mapping.inputnode_within, mapping.NiftiVolumes): No edge data
121117-19:30:55,871 workflow DEBUG:
	 (mapping.inputnode_within, mapping.NiftiVolumes): new edge data: {'connect': [('dwi', 'in2')]}
121117-19:30:55,871 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.NiftiVolumes): No edge data
121117-19:30:55,872 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.NiftiVolumes): new edge data: {'connect': [('out_file', 'in3')]}
121117-19:30:55,872 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): No edge data
121117-19:30:55,872 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1')]}
121117-19:30:55,873 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1')]}
121117-19:30:55,873 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2')]}
121117-19:30:55,873 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2')]}
121117-19:30:55,873 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3')]}
121117-19:30:55,873 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3')]}
121117-19:30:55,874 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3'), ('fiber_label_file', 'in4')]}
121117-19:30:55,874 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.CFFConverter): No edge data
121117-19:30:55,874 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.CFFConverter): new edge data: {'connect': [('out', 'gifti_surfaces')]}
121117-19:30:55,874 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.CFFConverter): No edge data
121117-19:30:55,874 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.CFFConverter): new edge data: {'connect': [('out', 'gifti_labels')]}
121117-19:30:55,875 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): No edge data
121117-19:30:55,875 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): new edge data: {'connect': [('matrix_files', 'gpickled_networks')]}
121117-19:30:55,875 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.CFFConverter): No edge data
121117-19:30:55,875 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.CFFConverter): new edge data: {'connect': [('out', 'nifti_volumes')]}
121117-19:30:55,875 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.CFFConverter): No edge data
121117-19:30:55,875 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.CFFConverter): new edge data: {'connect': [('out', 'data_files')]}
121117-19:30:55,876 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.CFFConverter): No edge data
121117-19:30:55,876 workflow DEBUG:
	 (mapping.camino2trackvis, mapping.CFFConverter): new edge data: {'connect': [('trackvis', 'tract_files')]}
121117-19:30:55,876 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CFFConverter): No edge data
121117-19:30:55,876 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CFFConverter): new edge data: {'connect': [('subject_id', 'title')]}
121117-19:30:56,175 workflow DEBUG:
	 (connectivity.inputnode, connectivity.mapping): No edge data
121117-19:30:56,175 workflow DEBUG:
	 (connectivity.inputnode, connectivity.mapping): new edge data: {'connect': [('dwi', 'inputnode_within.dwi'), ('bvals', 'inputnode_within.bvals'), ('bvecs', 'inputnode_within.bvecs'), ('subject_id', 'inputnode_within.subject_id'), ('subjects_dir', 'inputnode_within.subjects_dir'), ('resolution_network_file', 'inputnode_within.resolution_network_file')]}
121117-19:30:56,516 workflow DEBUG:
	 (connectivity.mapping, connectivity.outputnode): No edge data
121117-19:30:56,516 workflow DEBUG:
	 (connectivity.mapping, connectivity.outputnode): new edge data: {'connect': [('camino2trackvis.trackvis', 'tracts'), ('CFFConverter.connectome_file', 'connectome'), ('CreateMatrix.matrix_mat_file', 'cmatrix'), ('CreateMatrix.mean_fiber_length_matrix_mat_file', 'mean_fiber_length'), ('CreateMatrix.fiber_length_std_matrix_mat_file', 'fiber_length_std'), ('fa2nii.nifti_file', 'fa'), ('CreateMatrix.matrix_files', 'networks'), ('ROIGen.roi_file', 'rois'), ('mri_convert_Brain.out_file', 'struct'), ('trace2nii.nifti_file', 'trace'), ('dtifit.tensor_fitted', 'tensors')]}
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fsl2scheme;
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_bet_b0;
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_CreateMatrix;
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssource;
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_camino2trackvis;
121117-19:30:56,554 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_image2voxel;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_analyzeheader_trace;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_CFFConverter;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_CreateNodes;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssourceRH;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssourceLH;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_trace2nii;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_NiftiVolumes;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_analyzeheader_fa;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fa2nii;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_fssource -> connectivity_mapping_mri_convert_Brain;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_fssource -> connectivity_mapping_mri_convert_AparcAseg;
121117-19:30:56,555 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_coregister;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_inverse;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_NiftiVolumes;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_AparcAseg -> connectivity_mapping_inverse_AparcAseg;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_AparcAseg -> connectivity_mapping_ROIGen_structspace;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_image2voxel -> connectivity_mapping_dtifit;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_fsl2scheme -> connectivity_mapping_dtifit;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_fsl2scheme -> connectivity_mapping_dtlutgen;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_dtifit -> connectivity_mapping_picopdfs;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_dtifit -> connectivity_mapping_trace;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_dtifit -> connectivity_mapping_dteig;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_dtifit -> connectivity_mapping_fa;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_trace -> connectivity_mapping_analyzeheader_trace;
121117-19:30:56,556 workflow DEBUG:
	 connection: connectivity_mapping_trace -> connectivity_mapping_trace2nii;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_analyzeheader_trace -> connectivity_mapping_trace2nii;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fa -> connectivity_mapping_analyzeheader_fa;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fa -> connectivity_mapping_fa2nii;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_analyzeheader_fa -> connectivity_mapping_fa2nii;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_dtlutgen -> connectivity_mapping_picopdfs;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_picopdfs -> connectivity_mapping_track;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHsphere;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRH;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHlabels;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHwhite;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHinflated;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHsphere -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHlabels -> connectivity_mapping_GiftiLabels;
121117-19:30:56,557 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHinflated -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_ROIGen_structspace -> connectivity_mapping_CreateNodes;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_CreateNodes -> connectivity_mapping_CreateMatrix;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHinflated;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHsphere;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHlabels;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLH;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHwhite;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHinflated -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHsphere -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHlabels -> connectivity_mapping_GiftiLabels;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_GiftiLabels -> connectivity_mapping_CFFConverter;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLH -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,558 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHwhite -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_bet_b0 -> connectivity_mapping_coregister;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_bet_b0 -> connectivity_mapping_inverse;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_bet_b0 -> connectivity_mapping_inverse_AparcAseg;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_bet_b0 -> connectivity_mapping_track;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_coregister -> connectivity_mapping_convertxfm;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_convertxfm -> connectivity_mapping_inverse_AparcAseg;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_convertxfm -> connectivity_mapping_inverse;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_inverse_AparcAseg -> connectivity_mapping_ROIGen;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_ROIGen -> connectivity_mapping_CreateMatrix;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_ROIGen -> connectivity_mapping_NiftiVolumes;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_NiftiVolumes -> connectivity_mapping_CFFConverter;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_track -> connectivity_mapping_camino2trackvis;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_track -> connectivity_mapping_vtkstreamlines;
121117-19:30:56,559 workflow DEBUG:
	 connection: connectivity_mapping_camino2trackvis -> connectivity_mapping_CFFConverter;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_camino2trackvis -> connectivity_mapping_trk2camino;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_camino2trackvis -> connectivity_mapping_CreateMatrix;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_FiberDataArrays;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_CFFConverter;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_FiberDataArrays -> connectivity_mapping_CFFConverter;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHwhite -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRH -> connectivity_mapping_GiftiSurfaces;
121117-19:30:56,560 workflow DEBUG:
	 connection: connectivity_mapping_GiftiSurfaces -> connectivity_mapping_CFFConverter;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_mapping_camino2trackvis -> connectivity_outputnode;
121117-19:30:56,561 workflow DEBUG:
	 cross connection: connectivity_mapping_CFFConverter -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_fa2nii -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_ROIGen -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_mri_convert_Brain -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_trace2nii -> connectivity_outputnode;
121117-19:30:56,562 workflow DEBUG:
	 cross connection: connectivity_mapping_dtifit -> connectivity_outputnode;
121117-19:30:57,172 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpWCyHAW.dot to png format
121117-19:30:57,193 workflow DEBUG:
	 (tractography.inputnode1, tractography.bet): No edge data
121117-19:30:57,193 workflow DEBUG:
	 (tractography.inputnode1, tractography.bet): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:30:57,194 workflow DEBUG:
	 (tractography.inputnode1, tractography.image2voxel): No edge data
121117-19:30:57,194 workflow DEBUG:
	 (tractography.inputnode1, tractography.image2voxel): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:30:57,194 workflow DEBUG:
	 (tractography.inputnode1, tractography.fsl2scheme): No edge data
121117-19:30:57,194 workflow DEBUG:
	 (tractography.inputnode1, tractography.fsl2scheme): new edge data: {'connect': [('bvecs', 'bvec_file'), ('bvals', 'bval_file')]}
121117-19:30:57,195 workflow DEBUG:
	 (tractography.image2voxel, tractography.dtifit): No edge data
121117-19:30:57,195 workflow DEBUG:
	 (tractography.image2voxel, tractography.dtifit): new edge data: {'connect': [['voxel_order', 'in_file']]}
121117-19:30:57,195 workflow DEBUG:
	 (tractography.fsl2scheme, tractography.dtifit): No edge data
121117-19:30:57,195 workflow DEBUG:
	 (tractography.fsl2scheme, tractography.dtifit): new edge data: {'connect': [['scheme', 'scheme_file']]}
121117-19:30:57,195 workflow DEBUG:
	 (tractography.bet, tractography.trackdt): No edge data
121117-19:30:57,195 workflow DEBUG:
	 (tractography.bet, tractography.trackdt): new edge data: {'connect': [('mask_file', 'seed_file')]}
121117-19:30:57,196 workflow DEBUG:
	 (tractography.dtifit, tractography.trackdt): No edge data
121117-19:30:57,196 workflow DEBUG:
	 (tractography.dtifit, tractography.trackdt): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:57,196 workflow DEBUG:
	 (tractography.bet, tractography.trackpico): No edge data
121117-19:30:57,196 workflow DEBUG:
	 (tractography.bet, tractography.trackpico): new edge data: {'connect': [('mask_file', 'seed_file')]}
121117-19:30:57,196 workflow DEBUG:
	 (tractography.fsl2scheme, tractography.dtlutgen): No edge data
121117-19:30:57,196 workflow DEBUG:
	 (tractography.fsl2scheme, tractography.dtlutgen): new edge data: {'connect': [('scheme', 'scheme_file')]}
121117-19:30:57,196 workflow DEBUG:
	 (tractography.dtlutgen, tractography.picopdfs): No edge data
121117-19:30:57,196 workflow DEBUG:
	 (tractography.dtlutgen, tractography.picopdfs): new edge data: {'connect': [('dtLUT', 'luts')]}
121117-19:30:57,197 workflow DEBUG:
	 (tractography.dtifit, tractography.picopdfs): No edge data
121117-19:30:57,197 workflow DEBUG:
	 (tractography.dtifit, tractography.picopdfs): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:57,197 workflow DEBUG:
	 (tractography.picopdfs, tractography.trackpico): No edge data
121117-19:30:57,197 workflow DEBUG:
	 (tractography.picopdfs, tractography.trackpico): new edge data: {'connect': [('pdfs', 'in_file')]}
121117-19:30:57,197 workflow DEBUG:
	 (tractography.dtifit, tractography.fa): No edge data
121117-19:30:57,197 workflow DEBUG:
	 (tractography.dtifit, tractography.fa): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:57,197 workflow DEBUG:
	 (tractography.fa, tractography.analyzeheader_fa): No edge data
121117-19:30:57,198 workflow DEBUG:
	 (tractography.fa, tractography.analyzeheader_fa): new edge data: {'connect': [('fa', 'in_file')]}
121117-19:30:57,200 workflow DEBUG:
	 (tractography.inputnode1, tractography.analyzeheader_fa): No edge data
121117-19:30:57,200 workflow DEBUG:
	 (tractography.inputnode1, tractography.analyzeheader_fa): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:57,200 workflow DEBUG:
	 (tractography.fa, tractography.fa2nii): No edge data
121117-19:30:57,200 workflow DEBUG:
	 (tractography.fa, tractography.fa2nii): new edge data: {'connect': [('fa', 'data_file')]}
121117-19:30:57,201 workflow DEBUG:
	 (tractography.inputnode1, tractography.fa2nii): No edge data
121117-19:30:57,201 workflow DEBUG:
	 (tractography.inputnode1, tractography.fa2nii): new edge data: {'connect': [(('dwi', "S'def get_affine(volume):\\n    import nibabel as nb\\n    nii = nb.load(volume)\\n    return nii.get_affine()\\n'\n.", ()), 'affine')]}
121117-19:30:57,201 workflow DEBUG:
	 (tractography.analyzeheader_fa, tractography.fa2nii): No edge data
121117-19:30:57,201 workflow DEBUG:
	 (tractography.analyzeheader_fa, tractography.fa2nii): new edge data: {'connect': [('header', 'header_file')]}
121117-19:30:57,201 workflow DEBUG:
	 (tractography.dtifit, tractography.trace): No edge data
121117-19:30:57,201 workflow DEBUG:
	 (tractography.dtifit, tractography.trace): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:57,201 workflow DEBUG:
	 (tractography.trace, tractography.analyzeheader_trace): No edge data
121117-19:30:57,201 workflow DEBUG:
	 (tractography.trace, tractography.analyzeheader_trace): new edge data: {'connect': [('trace', 'in_file')]}
121117-19:30:57,203 workflow DEBUG:
	 (tractography.inputnode1, tractography.analyzeheader_trace): No edge data
121117-19:30:57,204 workflow DEBUG:
	 (tractography.inputnode1, tractography.analyzeheader_trace): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:57,204 workflow DEBUG:
	 (tractography.trace, tractography.trace2nii): No edge data
121117-19:30:57,204 workflow DEBUG:
	 (tractography.trace, tractography.trace2nii): new edge data: {'connect': [('trace', 'data_file')]}
121117-19:30:57,204 workflow DEBUG:
	 (tractography.inputnode1, tractography.trace2nii): No edge data
121117-19:30:57,205 workflow DEBUG:
	 (tractography.inputnode1, tractography.trace2nii): new edge data: {'connect': [(('dwi', "S'def get_affine(volume):\\n    import nibabel as nb\\n    nii = nb.load(volume)\\n    return nii.get_affine()\\n'\n.", ()), 'affine')]}
121117-19:30:57,205 workflow DEBUG:
	 (tractography.analyzeheader_trace, tractography.trace2nii): No edge data
121117-19:30:57,205 workflow DEBUG:
	 (tractography.analyzeheader_trace, tractography.trace2nii): new edge data: {'connect': [('header', 'header_file')]}
121117-19:30:57,205 workflow DEBUG:
	 (tractography.dtifit, tractography.dteig): No edge data
121117-19:30:57,205 workflow DEBUG:
	 (tractography.dtifit, tractography.dteig): new edge data: {'connect': [('tensor_fitted', 'in_file')]}
121117-19:30:57,205 workflow DEBUG:
	 (tractography.trackpico, tractography.cam2trk_pico): No edge data
121117-19:30:57,205 workflow DEBUG:
	 (tractography.trackpico, tractography.cam2trk_pico): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:30:57,206 workflow DEBUG:
	 (tractography.trackdt, tractography.cam2trk_dt): No edge data
121117-19:30:57,206 workflow DEBUG:
	 (tractography.trackdt, tractography.cam2trk_dt): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:30:57,208 workflow DEBUG:
	 (tractography.inputnode1, tractography.cam2trk_pico): No edge data
121117-19:30:57,208 workflow DEBUG:
	 (tractography.inputnode1, tractography.cam2trk_pico): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:57,210 workflow DEBUG:
	 (tractography.inputnode1, tractography.cam2trk_dt): No edge data
121117-19:30:57,210 workflow DEBUG:
	 (tractography.inputnode1, tractography.cam2trk_dt): new edge data: {'connect': [(('dwi', "S'def get_vox_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    voxdims = hdr.get_zooms()\\n    return [float(voxdims[0]), float(voxdims[1]), float(voxdims[2])]\\n'\n.", ()), 'voxel_dims'), (('dwi', "S'def get_data_dims(volume):\\n    import nibabel as nb\\n    if isinstance(volume, list):\\n        volume = volume[0]\\n    nii = nb.load(volume)\\n    hdr = nii.get_header()\\n    datadims = hdr.get_data_shape()\\n    return [int(datadims[0]), int(datadims[1]), int(datadims[2])]\\n'\n.", ()), 'data_dims')]}
121117-19:30:57,255 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tractography): No edge data
121117-19:30:57,255 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tractography): new edge data: {'connect': [('dwi', 'inputnode1.dwi'), ('bvals', 'inputnode1.bvals'), ('bvecs', 'inputnode1.bvecs')]}
121117-19:30:57,288 workflow DEBUG:
	 (dtiproc.tractography, dtiproc.outputnode): No edge data
121117-19:30:57,289 workflow DEBUG:
	 (dtiproc.tractography, dtiproc.outputnode): new edge data: {'connect': [('cam2trk_dt.trackvis', 'tracts_dt'), ('cam2trk_pico.trackvis', 'tracts_pico'), ('fa2nii.nifti_file', 'fa'), ('trace2nii.nifti_file', 'trace'), ('dtifit.tensor_fitted', 'tensors')]}
121117-19:30:57,310 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_trace2nii;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_bet;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_image2voxel;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_cam2trk_pico;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_fsl2scheme;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_fa2nii;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_analyzeheader_fa;
121117-19:30:57,311 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_analyzeheader_trace;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_inputnode1 -> dtiproc_tractography_cam2trk_dt;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_bet -> dtiproc_tractography_trackdt;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_bet -> dtiproc_tractography_trackpico;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_fsl2scheme -> dtiproc_tractography_dtifit;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_fsl2scheme -> dtiproc_tractography_dtlutgen;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtlutgen -> dtiproc_tractography_picopdfs;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_image2voxel -> dtiproc_tractography_dtifit;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtifit -> dtiproc_tractography_trackdt;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtifit -> dtiproc_tractography_dteig;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtifit -> dtiproc_tractography_trace;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtifit -> dtiproc_tractography_picopdfs;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_dtifit -> dtiproc_tractography_fa;
121117-19:30:57,312 workflow DEBUG:
	 connection: dtiproc_tractography_picopdfs -> dtiproc_tractography_trackpico;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_trackpico -> dtiproc_tractography_cam2trk_pico;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_trackdt -> dtiproc_tractography_cam2trk_dt;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_fa -> dtiproc_tractography_analyzeheader_fa;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_fa -> dtiproc_tractography_fa2nii;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_analyzeheader_fa -> dtiproc_tractography_fa2nii;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_trace -> dtiproc_tractography_analyzeheader_trace;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_trace -> dtiproc_tractography_trace2nii;
121117-19:30:57,313 workflow DEBUG:
	 connection: dtiproc_tractography_analyzeheader_trace -> dtiproc_tractography_trace2nii;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_inputnode -> dtiproc_tractography_inputnode1;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_inputnode -> dtiproc_tractography_inputnode1;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_inputnode -> dtiproc_tractography_inputnode1;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_tractography_cam2trk_dt -> dtiproc_outputnode;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_tractography_cam2trk_pico -> dtiproc_outputnode;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_tractography_fa2nii -> dtiproc_outputnode;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_tractography_trace2nii -> dtiproc_outputnode;
121117-19:30:57,314 workflow DEBUG:
	 cross connection: dtiproc_tractography_dtifit -> dtiproc_outputnode;
121117-19:30:57,444 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpd38WFs.dot to png format
WARNING: Empty - nipype.workflows.dmri.connectivity
121117-19:30:57,556 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:57,557 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.Matlab2CSV): No edge data
121117-19:30:57,558 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.Matlab2CSV): new edge data: {'connect': [('matlab_matrix_files', 'in_file')]}
121117-19:30:57,558 workflow DEBUG:
	 (cmats_to_csv.Matlab2CSV, cmats_to_csv.MergeCSVFiles): No edge data
121117-19:30:57,558 workflow DEBUG:
	 (cmats_to_csv.Matlab2CSV, cmats_to_csv.MergeCSVFiles): new edge data: {'connect': [('csv_files', 'in_files')]}
121117-19:30:57,558 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.MergeCSVFiles): No edge data
121117-19:30:57,558 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.MergeCSVFiles): new edge data: {'connect': [('extra_field', 'extra_field')]}
121117-19:30:57,559 workflow DEBUG:
	 (cmats_to_csv.MergeCSVFiles, cmats_to_csv.outputnode): No edge data
121117-19:30:57,560 workflow DEBUG:
	 (cmats_to_csv.MergeCSVFiles, cmats_to_csv.outputnode): new edge data: {'connect': [('csv_file', 'csv_file')]}
121117-19:30:57,567 workflow DEBUG:
	 (networkx.inputnode, networkx.NetworkXMetrics): No edge data
121117-19:30:57,567 workflow DEBUG:
	 (networkx.inputnode, networkx.NetworkXMetrics): new edge data: {'connect': [('network_file', 'in_file')]}
121117-19:30:57,567 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_node): No edge data
121117-19:30:57,567 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_node): new edge data: {'connect': [('node_measures_matlab', 'in_file')]}
121117-19:30:57,568 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_global): No edge data
121117-19:30:57,568 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_global): new edge data: {'connect': [('global_measures_matlab', 'in_file')]}
121117-19:30:57,568 workflow DEBUG:
	 (networkx.Matlab2CSV_node, networkx.MergeCSVFiles_node): No edge data
121117-19:30:57,568 workflow DEBUG:
	 (networkx.Matlab2CSV_node, networkx.MergeCSVFiles_node): new edge data: {'connect': [('csv_files', 'in_files')]}
121117-19:30:57,568 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): No edge data
121117-19:30:57,568 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file')]}
121117-19:30:57,569 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): Edge data exists: {'connect': [('extra_field', 'out_file')]}
121117-19:30:57,569 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field')]}
121117-19:30:57,571 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): Edge data exists: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field')]}
121117-19:30:57,571 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field'), (('network_file', 'S\'def pullnodeIDs(in_network, name_key=\\\'dn_name\\\'):\\n    """ This function will return the values contained, for each node in\\n    a network, given an input key. By default it will return the node names\\n    """\\n    import networkx as nx\\n    import numpy as np\\n    from nipype.interfaces.base import isdefined\\n    if not isdefined(in_network):\\n        raise ValueError\\n        return None\\n    try:\\n        ntwk = nx.read_graphml(in_network)\\n    except:\\n        ntwk = nx.read_gpickle(in_network)\\n    nodedata = ntwk.node\\n    ids = []\\n    integer_nodelist = []\\n    for node in nodedata.keys():\\n        integer_nodelist.append(int(node))\\n    for node in np.sort(integer_nodelist):\\n        try:\\n            nodeid = nodedata[node][name_key]\\n        except KeyError:\\n            nodeid = nodedata[str(node)][name_key]\\n        ids.append(nodeid)\\n    return ids\\n\'\n.', ()), 'row_headings')]}
121117-19:30:57,571 workflow DEBUG:
	 (networkx.inputnode, networkx.mergeNetworks): No edge data
121117-19:30:57,571 workflow DEBUG:
	 (networkx.inputnode, networkx.mergeNetworks): new edge data: {'connect': [('network_file', 'in1')]}
121117-19:30:57,572 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.mergeNetworks): No edge data
121117-19:30:57,572 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.mergeNetworks): new edge data: {'connect': [('gpickled_network_files', 'in2')]}
121117-19:30:57,573 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.outputnode): No edge data
121117-19:30:57,573 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.outputnode): new edge data: {'connect': [('csv_file', 'node_csv')]}
121117-19:30:57,573 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.outputnode): No edge data
121117-19:30:57,573 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.outputnode): new edge data: {'connect': [('csv_files', 'global_csv')]}
121117-19:30:57,574 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.mergeCSVs): No edge data
121117-19:30:57,574 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.mergeCSVs): new edge data: {'connect': [('csv_file', 'in1')]}
121117-19:30:57,574 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.mergeCSVs): No edge data
121117-19:30:57,574 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.mergeCSVs): new edge data: {'connect': [('csv_files', 'in2')]}
121117-19:30:57,574 workflow DEBUG:
	 (networkx.mergeNetworks, networkx.outputnode): No edge data
121117-19:30:57,574 workflow DEBUG:
	 (networkx.mergeNetworks, networkx.outputnode): new edge data: {'connect': [('out', 'network_files')]}
121117-19:30:57,574 workflow DEBUG:
	 (networkx.mergeCSVs, networkx.outputnode): No edge data
121117-19:30:57,574 workflow DEBUG:
	 (networkx.mergeCSVs, networkx.outputnode): new edge data: {'connect': [('out', 'csv_files')]}
121117-19:30:57,575 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.outputnode): No edge data
121117-19:30:57,575 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.outputnode): new edge data: {'connect': [('matlab_matrix_files', 'matlab_files')]}
121117-19:30:57,587 workflow DEBUG:
	 connection: cmats_to_csv_inputnode -> cmats_to_csv_Matlab2CSV;
121117-19:30:57,588 workflow DEBUG:
	 connection: cmats_to_csv_inputnode -> cmats_to_csv_MergeCSVFiles;
121117-19:30:57,588 workflow DEBUG:
	 connection: cmats_to_csv_Matlab2CSV -> cmats_to_csv_MergeCSVFiles;
121117-19:30:57,588 workflow DEBUG:
	 connection: cmats_to_csv_MergeCSVFiles -> cmats_to_csv_outputnode;
121117-19:30:57,627 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpJuUIUm.dot to png format
121117-19:30:57,642 workflow DEBUG:
	 connection: networkx_inputnode -> networkx_NetworkXMetrics;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_inputnode -> networkx_mergeNetworks;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_inputnode -> networkx_MergeCSVFiles_node;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_NetworkXMetrics -> networkx_outputnode;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_NetworkXMetrics -> networkx_mergeNetworks;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_NetworkXMetrics -> networkx_Matlab2CSV_node;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_NetworkXMetrics -> networkx_Matlab2CSV_global;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_mergeNetworks -> networkx_outputnode;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_Matlab2CSV_node -> networkx_MergeCSVFiles_node;
121117-19:30:57,643 workflow DEBUG:
	 connection: networkx_MergeCSVFiles_node -> networkx_mergeCSVs;
121117-19:30:57,644 workflow DEBUG:
	 connection: networkx_MergeCSVFiles_node -> networkx_outputnode;
121117-19:30:57,644 workflow DEBUG:
	 connection: networkx_Matlab2CSV_global -> networkx_mergeCSVs;
121117-19:30:57,644 workflow DEBUG:
	 connection: networkx_Matlab2CSV_global -> networkx_outputnode;
121117-19:30:57,644 workflow DEBUG:
	 connection: networkx_mergeCSVs -> networkx_outputnode;
121117-19:30:57,721 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpQ8WhiY.dot to png format
WARNING: Empty - nipype.workflows.dmri.fsl
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.mask_dwi): No edge data
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.mask_dwi): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.mask_dwi): Edge data exists: {'connect': [('dwi', 'in_file')]}
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.mask_dwi): new edge data: {'connect': [('dwi', 'in_file'), ('mask', 'in_file2')]}
121117-19:30:57,729 workflow DEBUG:
	 (preproc.mask_dwi, preproc.slice_dwi): No edge data
121117-19:30:57,729 workflow DEBUG:
	 (preproc.mask_dwi, preproc.slice_dwi): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.slice_mask): No edge data
121117-19:30:57,729 workflow DEBUG:
	 (preproc.inputnode, preproc.slice_mask): new edge data: {'connect': [('mask', 'in_file')]}
121117-19:30:57,731 workflow DEBUG:
	 adding multipath trait: dwi
121117-19:30:57,732 workflow DEBUG:
	 adding multipath trait: mask
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: n_fibres -> 2
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: fudge -> 1
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: burn_in -> 1000
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: n_jumps -> 1250
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: sample_every -> 25
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: model -> 1
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: non_linear -> True
121117-19:30:57,733 workflow DEBUG:
	 setting mapnode(xfibres) input: update_proposal_every -> 24
121117-19:30:57,736 workflow DEBUG:
	 adding multipath trait: in_files
121117-19:30:57,737 workflow DEBUG:
	 adding multipath trait: in_files
121117-19:30:57,739 workflow DEBUG:
	 adding multipath trait: in_files
121117-19:30:57,741 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:57,743 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:57,745 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:57,747 workflow DEBUG:
	 adding multipath trait: phi_vol
121117-19:30:57,747 workflow DEBUG:
	 adding multipath trait: theta_vol
121117-19:30:57,752 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_thsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_thsamples): new edge data: {'connect': [(('thsamples', "S'def transpose(samples_over_fibres):\\n    import numpy as np\\n    a = np.array(samples_over_fibres)\\n    if len(a.shape)==1:\\n        a = a.reshape(-1,1)\\n    return a.T.tolist()\\n'\n.", ()), 'in_files')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_phsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_phsamples): new edge data: {'connect': [(('phsamples', "S'def transpose(samples_over_fibres):\\n    import numpy as np\\n    a = np.array(samples_over_fibres)\\n    if len(a.shape)==1:\\n        a = a.reshape(-1,1)\\n    return a.T.tolist()\\n'\n.", ()), 'in_files')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_fsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_fsamples): new edge data: {'connect': [(('fsamples', "S'def transpose(samples_over_fibres):\\n    import numpy as np\\n    a = np.array(samples_over_fibres)\\n    if len(a.shape)==1:\\n        a = a.reshape(-1,1)\\n    return a.T.tolist()\\n'\n.", ()), 'in_files')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_mean_dsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.inputnode, postproc.merge_mean_dsamples): new edge data: {'connect': [('mean_dsamples', 'in_files')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_thsamples, postproc.mean_thsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_thsamples, postproc.mean_thsamples): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_phsamples, postproc.mean_phsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_phsamples, postproc.mean_phsamples): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_fsamples, postproc.mean_fsamples): No edge data
121117-19:30:57,753 workflow DEBUG:
	 (postproc.merge_fsamples, postproc.mean_fsamples): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:57,754 workflow DEBUG:
	 (postproc.merge_thsamples, postproc.make_dyads): No edge data
121117-19:30:57,754 workflow DEBUG:
	 (postproc.merge_thsamples, postproc.make_dyads): new edge data: {'connect': [('merged_file', 'theta_vol')]}
121117-19:30:57,754 workflow DEBUG:
	 (postproc.merge_phsamples, postproc.make_dyads): No edge data
121117-19:30:57,754 workflow DEBUG:
	 (postproc.merge_phsamples, postproc.make_dyads): new edge data: {'connect': [('merged_file', 'phi_vol')]}
121117-19:30:57,754 workflow DEBUG:
	 (postproc.inputnode, postproc.make_dyads): No edge data
121117-19:30:57,754 workflow DEBUG:
	 (postproc.inputnode, postproc.make_dyads): new edge data: {'connect': [('mask', 'mask')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.preproc): No edge data
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.preproc): new edge data: {'connect': [('mask', 'inputnode.mask')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.preproc): Edge data exists: {'connect': [('mask', 'inputnode.mask')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.preproc): new edge data: {'connect': [('mask', 'inputnode.mask'), ('dwi', 'inputnode.dwi')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.preproc, bedpostx.xfibres): No edge data
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.preproc, bedpostx.xfibres): new edge data: {'connect': [('slice_dwi.out_files', 'dwi'), ('slice_mask.out_files', 'mask')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.xfibres): No edge data
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.xfibres): new edge data: {'connect': [('bvals', 'bvals')]}
121117-19:30:57,801 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.xfibres): Edge data exists: {'connect': [('bvals', 'bvals')]}
121117-19:30:57,802 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.xfibres): new edge data: {'connect': [('bvals', 'bvals'), ('bvecs', 'bvecs')]}
121117-19:30:57,802 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.postproc): No edge data
121117-19:30:57,802 workflow DEBUG:
	 (bedpostx.inputnode, bedpostx.postproc): new edge data: {'connect': [('mask', 'inputnode.mask')]}
121117-19:30:57,802 workflow DEBUG:
	 (bedpostx.xfibres, bedpostx.postproc): No edge data
121117-19:30:57,802 workflow DEBUG:
	 (bedpostx.xfibres, bedpostx.postproc): new edge data: {'connect': [('thsamples', 'inputnode.thsamples'), ('phsamples', 'inputnode.phsamples'), ('fsamples', 'inputnode.fsamples'), ('dyads', 'inputnode.dyads'), ('mean_dsamples', 'inputnode.mean_dsamples')]}
121117-19:30:57,843 workflow DEBUG:
	 (bedpostx.postproc, bedpostx.outputnode): No edge data
121117-19:30:57,843 workflow DEBUG:
	 (bedpostx.postproc, bedpostx.outputnode): new edge data: {'connect': [('merge_thsamples.merged_file', 'thsamples'), ('merge_phsamples.merged_file', 'phsamples'), ('merge_fsamples.merged_file', 'fsamples'), ('mean_thsamples.out_file', 'mean_thsamples'), ('mean_phsamples.out_file', 'mean_phsamples'), ('mean_fsamples.out_file', 'mean_fsamples'), ('make_dyads.dyads', 'dyads'), ('make_dyads.dispersion', 'dyads_dispersion')]}
121117-19:30:57,846 workflow DEBUG:
	 (eddy_correct.inputnode, eddy_correct.split): No edge data
121117-19:30:57,846 workflow DEBUG:
	 (eddy_correct.inputnode, eddy_correct.split): new edge data: {'connect': [('in_file', 'in_file')]}
121117-19:30:57,847 workflow DEBUG:
	 (eddy_correct.split, eddy_correct.pick_ref): No edge data
121117-19:30:57,847 workflow DEBUG:
	 (eddy_correct.split, eddy_correct.pick_ref): new edge data: {'connect': [('out_files', 'inlist')]}
121117-19:30:57,847 workflow DEBUG:
	 (eddy_correct.inputnode, eddy_correct.pick_ref): No edge data
121117-19:30:57,847 workflow DEBUG:
	 (eddy_correct.inputnode, eddy_correct.pick_ref): new edge data: {'connect': [('ref_num', 'index')]}
121117-19:30:57,849 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:57,851 workflow DEBUG:
	 (eddy_correct.split, eddy_correct.coregistration): No edge data
121117-19:30:57,851 workflow DEBUG:
	 (eddy_correct.split, eddy_correct.coregistration): new edge data: {'connect': [('out_files', 'in_file')]}
121117-19:30:57,851 workflow DEBUG:
	 (eddy_correct.pick_ref, eddy_correct.coregistration): No edge data
121117-19:30:57,851 workflow DEBUG:
	 (eddy_correct.pick_ref, eddy_correct.coregistration): new edge data: {'connect': [('out', 'reference')]}
121117-19:30:57,853 workflow DEBUG:
	 (eddy_correct.coregistration, eddy_correct.merge): No edge data
121117-19:30:57,853 workflow DEBUG:
	 (eddy_correct.coregistration, eddy_correct.merge): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:30:57,854 workflow DEBUG:
	 (eddy_correct.merge, eddy_correct.outputnode): No edge data
121117-19:30:57,854 workflow DEBUG:
	 (eddy_correct.merge, eddy_correct.outputnode): new edge data: {'connect': [('merged_file', 'eddy_corrected')]}
121117-19:30:57,873 workflow DEBUG:
	 connection: bedpostx_inputnode -> bedpostx_xfibres;
121117-19:30:57,873 workflow DEBUG:
	 connection: bedpostx_preproc_inputnode -> bedpostx_preproc_mask_dwi;
121117-19:30:57,873 workflow DEBUG:
	 connection: bedpostx_preproc_inputnode -> bedpostx_preproc_slice_mask;
121117-19:30:57,873 workflow DEBUG:
	 connection: bedpostx_preproc_mask_dwi -> bedpostx_preproc_slice_dwi;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_inputnode -> bedpostx_postproc_merge_mean_dsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_inputnode -> bedpostx_postproc_merge_thsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_inputnode -> bedpostx_postproc_make_dyads;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_inputnode -> bedpostx_postproc_merge_phsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_inputnode -> bedpostx_postproc_merge_fsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_merge_thsamples -> bedpostx_postproc_mean_thsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_merge_thsamples -> bedpostx_postproc_make_dyads;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_merge_fsamples -> bedpostx_postproc_mean_fsamples;
121117-19:30:57,874 workflow DEBUG:
	 connection: bedpostx_postproc_merge_phsamples -> bedpostx_postproc_mean_phsamples;
121117-19:30:57,875 workflow DEBUG:
	 connection: bedpostx_postproc_merge_phsamples -> bedpostx_postproc_make_dyads;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_inputnode -> bedpostx_preproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_inputnode -> bedpostx_preproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_inputnode -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_xfibres -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_xfibres -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_xfibres -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_xfibres -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_xfibres -> bedpostx_postproc_inputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_postproc_merge_thsamples -> bedpostx_outputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_postproc_merge_phsamples -> bedpostx_outputnode;
121117-19:30:57,875 workflow DEBUG:
	 cross connection: bedpostx_postproc_merge_fsamples -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_postproc_mean_thsamples -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_postproc_mean_phsamples -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_postproc_mean_fsamples -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_postproc_make_dyads -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_postproc_make_dyads -> bedpostx_outputnode;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_preproc_slice_dwi -> bedpostx_xfibres;
121117-19:30:57,876 workflow DEBUG:
	 cross connection: bedpostx_preproc_slice_mask -> bedpostx_xfibres;
121117-19:30:57,999 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpFpjQfA.dot to png format
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_inputnode -> eddy_correct_pick_ref;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_inputnode -> eddy_correct_split;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_split -> eddy_correct_pick_ref;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_split -> eddy_correct_coregistration;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_pick_ref -> eddy_correct_coregistration;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_coregistration -> eddy_correct_merge;
121117-19:30:58,14 workflow DEBUG:
	 connection: eddy_correct_merge -> eddy_correct_outputnode;
121117-19:30:58,58 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpYdze2o.dot to png format
121117-19:30:58,76 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,76 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:30:58,79 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,81 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,83 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,83 workflow DEBUG:
	 adding multipath trait: operand_files
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.inputnode, tbss_1_preproc.prepfa): No edge data
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.inputnode, tbss_1_preproc.prepfa): new edge data: {'connect': [('fa_list', 'in_file')]}
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.inputnode, tbss_1_preproc.prepfa): Edge data exists: {'connect': [('fa_list', 'in_file')]}
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.inputnode, tbss_1_preproc.prepfa): new edge data: {'connect': [('fa_list', 'in_file'), (('fa_list', 'S"def tbss1_op_string(in_files):\\n    import nibabel as nib\\n    op_strings = []\\n    for infile in in_files:\\n        img = nib.load(infile)\\n        dimtup = tuple([d - 2 for d in img.get_shape()])\\n        op_str = \'-min 1 -ero -roi 1 %d 1 %d 1 %d 0 1\' % dimtup\\n        op_strings.append(op_str)\\n    return op_strings\\n"\n.', ()), 'op_string')]}
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.getmask1): No edge data
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.getmask1): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.getmask1, tbss_1_preproc.getmask2): No edge data
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.getmask1, tbss_1_preproc.getmask2): new edge data: {'connect': [('out_file', 'in_file'), ('out_file', 'operand_files')]}
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.slicer): No edge data
121117-19:30:58,87 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.slicer): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,89 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.outputnode): No edge data
121117-19:30:58,89 workflow DEBUG:
	 (tbss_1_preproc.prepfa, tbss_1_preproc.outputnode): new edge data: {'connect': [('out_file', 'fa_list')]}
121117-19:30:58,89 workflow DEBUG:
	 (tbss_1_preproc.getmask2, tbss_1_preproc.outputnode): No edge data
121117-19:30:58,89 workflow DEBUG:
	 (tbss_1_preproc.getmask2, tbss_1_preproc.outputnode): new edge data: {'connect': [('out_file', 'mask_list')]}
121117-19:30:58,89 workflow DEBUG:
	 (tbss_1_preproc.slicer, tbss_1_preproc.outputnode): No edge data
121117-19:30:58,90 workflow DEBUG:
	 (tbss_1_preproc.slicer, tbss_1_preproc.outputnode): new edge data: {'connect': [('out_file', 'slices')]}
121117-19:30:58,93 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,93 workflow DEBUG:
	 adding multipath trait: in_weight
121117-19:30:58,96 workflow DEBUG:
	 adding multipath trait: affine_file
121117-19:30:58,97 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,98 workflow DEBUG:
	 adding multipath trait: inmask_file
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.inputnode, tbss_2_reg.flirt): No edge data
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.inputnode, tbss_2_reg.flirt): new edge data: {'connect': [('fa_list', 'in_file'), ('target', 'reference'), ('mask_list', 'in_weight')]}
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.inputnode, tbss_2_reg.fnirt): No edge data
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.inputnode, tbss_2_reg.fnirt): new edge data: {'connect': [('fa_list', 'in_file'), ('mask_list', 'inmask_file'), ('target', 'ref_file')]}
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.flirt, tbss_2_reg.fnirt): No edge data
121117-19:30:58,102 workflow DEBUG:
	 (tbss_2_reg.flirt, tbss_2_reg.fnirt): new edge data: {'connect': [('out_matrix_file', 'affine_file')]}
121117-19:30:58,103 workflow DEBUG:
	 (tbss_2_reg.fnirt, tbss_2_reg.outputnode): No edge data
121117-19:30:58,103 workflow DEBUG:
	 (tbss_2_reg.fnirt, tbss_2_reg.outputnode): new edge data: {'connect': [('fieldcoeff_file', 'field_list')]}
121117-19:30:58,106 workflow DEBUG:
	 adding multipath trait: field_file
121117-19:30:58,106 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,110 workflow DEBUG:
	 (tbss_3_postreg.inputnode, tbss_3_postreg.applywarp): No edge data
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.inputnode, tbss_3_postreg.applywarp): new edge data: {'connect': [('fa_list', 'in_file'), ('field_list', 'field_file')]}
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.applywarp, tbss_3_postreg.mergefa): No edge data
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.applywarp, tbss_3_postreg.mergefa): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.mergefa, tbss_3_postreg.groupmask): No edge data
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.mergefa, tbss_3_postreg.groupmask): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.mergefa, tbss_3_postreg.maskgroup): No edge data
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.mergefa, tbss_3_postreg.maskgroup): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.groupmask, tbss_3_postreg.maskgroup): No edge data
121117-19:30:58,111 workflow DEBUG:
	 (tbss_3_postreg.groupmask, tbss_3_postreg.maskgroup): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.maskgroup, tbss_3_postreg.meanfa): No edge data
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.maskgroup, tbss_3_postreg.meanfa): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.meanfa, tbss_3_postreg.makeskeleton): No edge data
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.meanfa, tbss_3_postreg.makeskeleton): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.groupmask, tbss_3_postreg.outputnode): No edge data
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.groupmask, tbss_3_postreg.outputnode): new edge data: {'connect': [('out_file', 'groupmask')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.makeskeleton, tbss_3_postreg.outputnode): No edge data
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.makeskeleton, tbss_3_postreg.outputnode): new edge data: {'connect': [('skeleton_file', 'skeleton_file')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.meanfa, tbss_3_postreg.outputnode): No edge data
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.meanfa, tbss_3_postreg.outputnode): new edge data: {'connect': [('out_file', 'meanfa_file')]}
121117-19:30:58,115 workflow DEBUG:
	 (tbss_3_postreg.maskgroup, tbss_3_postreg.outputnode): No edge data
121117-19:30:58,116 workflow DEBUG:
	 (tbss_3_postreg.maskgroup, tbss_3_postreg.outputnode): new edge data: {'connect': [('out_file', 'mergefa_file')]}
121117-19:30:58,123 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.invertmask): No edge data
121117-19:30:58,123 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.invertmask): new edge data: {'connect': [('groupmask', 'in_file')]}
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.skeletonmask): No edge data
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.skeletonmask): new edge data: {'connect': [('skeleton_file', 'in_file'), (('skeleton_thresh', 'S\'def tbss4_op_string(skeleton_thresh):\\n    op_string = "-thr %.1f -bin" % skeleton_thresh\\n    return op_string\\n\'\n.', ()), 'op_string')]}
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.projectfa): No edge data
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.inputnode, tbss_4_prestats.projectfa): new edge data: {'connect': [('skeleton_thresh', 'threshold'), ('meanfa_file', 'in_file'), ('mergefa_file', 'data_file')]}
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.skeletonmask, tbss_4_prestats.invertmask): No edge data
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.skeletonmask, tbss_4_prestats.invertmask): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.invertmask, tbss_4_prestats.distancemap): No edge data
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.invertmask, tbss_4_prestats.distancemap): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.distancemap, tbss_4_prestats.projectfa): No edge data
121117-19:30:58,124 workflow DEBUG:
	 (tbss_4_prestats.distancemap, tbss_4_prestats.projectfa): new edge data: {'connect': [('distance_map', 'distance_map')]}
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.projectfa, tbss_4_prestats.outputnode): No edge data
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.projectfa, tbss_4_prestats.outputnode): new edge data: {'connect': [('projected_data', 'projectedfa_file'), ('skeleton_file', 'skeleton_file')]}
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.distancemap, tbss_4_prestats.outputnode): No edge data
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.distancemap, tbss_4_prestats.outputnode): new edge data: {'connect': [('distance_map', 'distance_map')]}
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.skeletonmask, tbss_4_prestats.outputnode): No edge data
121117-19:30:58,126 workflow DEBUG:
	 (tbss_4_prestats.skeletonmask, tbss_4_prestats.outputnode): new edge data: {'connect': [('out_file', 'skeleton_mask')]}
121117-19:30:58,129 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,129 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:30:58,131 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,133 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,135 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,136 workflow DEBUG:
	 adding multipath trait: operand_files
121117-19:30:58,138 workflow DEBUG:
	 (tbss1.inputnode, tbss1.prepfa): No edge data
121117-19:30:58,138 workflow DEBUG:
	 (tbss1.inputnode, tbss1.prepfa): new edge data: {'connect': [('fa_list', 'in_file')]}
121117-19:30:58,138 workflow DEBUG:
	 (tbss1.inputnode, tbss1.prepfa): Edge data exists: {'connect': [('fa_list', 'in_file')]}
121117-19:30:58,138 workflow DEBUG:
	 (tbss1.inputnode, tbss1.prepfa): new edge data: {'connect': [('fa_list', 'in_file'), (('fa_list', 'S"def tbss1_op_string(in_files):\\n    import nibabel as nib\\n    op_strings = []\\n    for infile in in_files:\\n        img = nib.load(infile)\\n        dimtup = tuple([d - 2 for d in img.get_shape()])\\n        op_str = \'-min 1 -ero -roi 1 %d 1 %d 1 %d 0 1\' % dimtup\\n        op_strings.append(op_str)\\n    return op_strings\\n"\n.', ()), 'op_string')]}
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.prepfa, tbss1.getmask1): No edge data
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.prepfa, tbss1.getmask1): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.getmask1, tbss1.getmask2): No edge data
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.getmask1, tbss1.getmask2): new edge data: {'connect': [('out_file', 'in_file'), ('out_file', 'operand_files')]}
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.prepfa, tbss1.slicer): No edge data
121117-19:30:58,139 workflow DEBUG:
	 (tbss1.prepfa, tbss1.slicer): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,140 workflow DEBUG:
	 (tbss1.prepfa, tbss1.outputnode): No edge data
121117-19:30:58,140 workflow DEBUG:
	 (tbss1.prepfa, tbss1.outputnode): new edge data: {'connect': [('out_file', 'fa_list')]}
121117-19:30:58,140 workflow DEBUG:
	 (tbss1.getmask2, tbss1.outputnode): No edge data
121117-19:30:58,141 workflow DEBUG:
	 (tbss1.getmask2, tbss1.outputnode): new edge data: {'connect': [('out_file', 'mask_list')]}
121117-19:30:58,141 workflow DEBUG:
	 (tbss1.slicer, tbss1.outputnode): No edge data
121117-19:30:58,141 workflow DEBUG:
	 (tbss1.slicer, tbss1.outputnode): new edge data: {'connect': [('out_file', 'slices')]}
121117-19:30:58,144 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,144 workflow DEBUG:
	 adding multipath trait: in_weight
121117-19:30:58,147 workflow DEBUG:
	 adding multipath trait: affine_file
121117-19:30:58,148 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,148 workflow DEBUG:
	 adding multipath trait: inmask_file
121117-19:30:58,152 workflow DEBUG:
	 (tbss2.inputnode, tbss2.flirt): No edge data
121117-19:30:58,152 workflow DEBUG:
	 (tbss2.inputnode, tbss2.flirt): new edge data: {'connect': [('fa_list', 'in_file'), ('target', 'reference'), ('mask_list', 'in_weight')]}
121117-19:30:58,153 workflow DEBUG:
	 (tbss2.inputnode, tbss2.fnirt): No edge data
121117-19:30:58,153 workflow DEBUG:
	 (tbss2.inputnode, tbss2.fnirt): new edge data: {'connect': [('fa_list', 'in_file'), ('mask_list', 'inmask_file'), ('target', 'ref_file')]}
121117-19:30:58,153 workflow DEBUG:
	 (tbss2.flirt, tbss2.fnirt): No edge data
121117-19:30:58,153 workflow DEBUG:
	 (tbss2.flirt, tbss2.fnirt): new edge data: {'connect': [('out_matrix_file', 'affine_file')]}
121117-19:30:58,154 workflow DEBUG:
	 (tbss2.fnirt, tbss2.outputnode): No edge data
121117-19:30:58,154 workflow DEBUG:
	 (tbss2.fnirt, tbss2.outputnode): new edge data: {'connect': [('fieldcoeff_file', 'field_list')]}
121117-19:30:58,156 workflow DEBUG:
	 adding multipath trait: field_file
121117-19:30:58,156 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.inputnode, tbss3.applywarp): No edge data
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.inputnode, tbss3.applywarp): new edge data: {'connect': [('fa_list', 'in_file'), ('field_list', 'field_file')]}
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.applywarp, tbss3.mergefa): No edge data
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.applywarp, tbss3.mergefa): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.mergefa, tbss3.groupmask): No edge data
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.mergefa, tbss3.groupmask): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:58,161 workflow DEBUG:
	 (tbss3.mergefa, tbss3.maskgroup): No edge data
121117-19:30:58,162 workflow DEBUG:
	 (tbss3.mergefa, tbss3.maskgroup): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:58,162 workflow DEBUG:
	 (tbss3.groupmask, tbss3.maskgroup): No edge data
121117-19:30:58,162 workflow DEBUG:
	 (tbss3.groupmask, tbss3.maskgroup): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:30:58,165 workflow DEBUG:
	 (tbss3.maskgroup, tbss3.meanfa): No edge data
121117-19:30:58,165 workflow DEBUG:
	 (tbss3.maskgroup, tbss3.meanfa): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,165 workflow DEBUG:
	 (tbss3.meanfa, tbss3.makeskeleton): No edge data
121117-19:30:58,165 workflow DEBUG:
	 (tbss3.meanfa, tbss3.makeskeleton): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,165 workflow DEBUG:
	 (tbss3.groupmask, tbss3.outputnode): No edge data
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.groupmask, tbss3.outputnode): new edge data: {'connect': [('out_file', 'groupmask')]}
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.makeskeleton, tbss3.outputnode): No edge data
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.makeskeleton, tbss3.outputnode): new edge data: {'connect': [('skeleton_file', 'skeleton_file')]}
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.meanfa, tbss3.outputnode): No edge data
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.meanfa, tbss3.outputnode): new edge data: {'connect': [('out_file', 'meanfa_file')]}
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.maskgroup, tbss3.outputnode): No edge data
121117-19:30:58,166 workflow DEBUG:
	 (tbss3.maskgroup, tbss3.outputnode): new edge data: {'connect': [('out_file', 'mergefa_file')]}
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.invertmask): No edge data
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.invertmask): new edge data: {'connect': [('groupmask', 'in_file')]}
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.skeletonmask): No edge data
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.skeletonmask): new edge data: {'connect': [('skeleton_file', 'in_file'), (('skeleton_thresh', 'S\'def tbss4_op_string(skeleton_thresh):\\n    op_string = "-thr %.1f -bin" % skeleton_thresh\\n    return op_string\\n\'\n.', ()), 'op_string')]}
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.projectfa): No edge data
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.inputnode, tbss4.projectfa): new edge data: {'connect': [('skeleton_thresh', 'threshold'), ('meanfa_file', 'in_file'), ('mergefa_file', 'data_file')]}
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.skeletonmask, tbss4.invertmask): No edge data
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.skeletonmask, tbss4.invertmask): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:30:58,174 workflow DEBUG:
	 (tbss4.invertmask, tbss4.distancemap): No edge data
121117-19:30:58,175 workflow DEBUG:
	 (tbss4.invertmask, tbss4.distancemap): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,175 workflow DEBUG:
	 (tbss4.distancemap, tbss4.projectfa): No edge data
121117-19:30:58,175 workflow DEBUG:
	 (tbss4.distancemap, tbss4.projectfa): new edge data: {'connect': [('distance_map', 'distance_map')]}
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.projectfa, tbss4.outputnode): No edge data
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.projectfa, tbss4.outputnode): new edge data: {'connect': [('projected_data', 'projectedfa_file'), ('skeleton_file', 'skeleton_file')]}
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.distancemap, tbss4.outputnode): No edge data
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.distancemap, tbss4.outputnode): new edge data: {'connect': [('distance_map', 'distance_map')]}
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.skeletonmask, tbss4.outputnode): No edge data
121117-19:30:58,176 workflow DEBUG:
	 (tbss4.skeletonmask, tbss4.outputnode): new edge data: {'connect': [('out_file', 'skeleton_mask')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.inputnode, tbss_all.tbss1): No edge data
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.inputnode, tbss_all.tbss1): new edge data: {'connect': [('fa_list', 'inputnode.fa_list')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.inputnode, tbss_all.tbss4): No edge data
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.inputnode, tbss_all.tbss4): new edge data: {'connect': [('skeleton_thresh', 'inputnode.skeleton_thresh')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.tbss2): No edge data
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.tbss2): new edge data: {'connect': [('outputnode.fa_list', 'inputnode.fa_list'), ('outputnode.mask_list', 'inputnode.mask_list')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.tbss3): No edge data
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.tbss3): new edge data: {'connect': [('outputnode.fa_list', 'inputnode.fa_list')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss2, tbss_all.tbss3): No edge data
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss2, tbss_all.tbss3): new edge data: {'connect': [('outputnode.field_list', 'inputnode.field_list')]}
121117-19:30:58,257 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.tbss4): No edge data
121117-19:30:58,258 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.tbss4): new edge data: {'connect': [('outputnode.groupmask', 'inputnode.groupmask'), ('outputnode.skeleton_file', 'inputnode.skeleton_file'), ('outputnode.meanfa_file', 'inputnode.meanfa_file'), ('outputnode.mergefa_file', 'inputnode.mergefa_file')]}
121117-19:30:58,321 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.outputnode): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.outputnode): new edge data: {'connect': [('outputnode.meanfa_file', 'meanfa_file'), ('outputnode.mergefa_file', 'mergefa_file'), ('outputnode.groupmask', 'groupmask'), ('outputnode.skeleton_file', 'skeleton_file3')]}
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss4, tbss_all.outputnode): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss4, tbss_all.outputnode): new edge data: {'connect': [('outputnode.projectedfa_file', 'projectedfa_file'), ('outputnode.skeleton_file', 'skeleton_file4'), ('outputnode.skeleton_mask', 'skeleton_mask'), ('outputnode.distance_map', 'distance_map')]}
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.outputall_node): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss1, tbss_all.outputall_node): new edge data: {'connect': [('outputnode.fa_list', 'fa_list1'), ('outputnode.mask_list', 'mask_list1')]}
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss2, tbss_all.outputall_node): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss2, tbss_all.outputall_node): new edge data: {'connect': [('outputnode.field_list', 'field_list2')]}
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.outputall_node): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss3, tbss_all.outputall_node): new edge data: {'connect': [('outputnode.meanfa_file', 'meanfa_file3'), ('outputnode.mergefa_file', 'mergefa_file3'), ('outputnode.groupmask', 'groupmask3'), ('outputnode.skeleton_file', 'skeleton_file3')]}
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss4, tbss_all.outputall_node): No edge data
121117-19:30:58,322 workflow DEBUG:
	 (tbss_all.tbss4, tbss_all.outputall_node): new edge data: {'connect': [('outputnode.projectedfa_file', 'projectedfa_file4'), ('outputnode.skeleton_mask', 'skeleton_mask4'), ('outputnode.distance_map', 'distance_map4')]}
121117-19:30:58,325 workflow DEBUG:
	 adding multipath trait: field_file
121117-19:30:58,325 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,332 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.applywarp): No edge data
121117-19:30:58,332 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.applywarp): new edge data: {'connect': [('file_list', 'in_file'), ('field_list', 'field_file')]}
121117-19:30:58,332 workflow DEBUG:
	 (tbss_non_FA.applywarp, tbss_non_FA.merge): No edge data
121117-19:30:58,332 workflow DEBUG:
	 (tbss_non_FA.applywarp, tbss_non_FA.merge): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.merge, tbss_non_FA.maskgroup): No edge data
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.merge, tbss_non_FA.maskgroup): new edge data: {'connect': [('merged_file', 'in_file')]}
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.maskgroup): No edge data
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.maskgroup): new edge data: {'connect': [('groupmask', 'in_file2')]}
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.maskgroup, tbss_non_FA.projectfa): No edge data
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.maskgroup, tbss_non_FA.projectfa): new edge data: {'connect': [('out_file', 'data_file')]}
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.projectfa): No edge data
121117-19:30:58,333 workflow DEBUG:
	 (tbss_non_FA.inputnode, tbss_non_FA.projectfa): new edge data: {'connect': [('skeleton_thresh', 'threshold'), ('meanfa_file', 'in_file'), ('distance_map', 'distance_map')]}
121117-19:30:58,334 workflow DEBUG:
	 (tbss_non_FA.projectfa, tbss_non_FA.outputnode): No edge data
121117-19:30:58,334 workflow DEBUG:
	 (tbss_non_FA.projectfa, tbss_non_FA.outputnode): new edge data: {'connect': [('projected_data', 'projected_nonFA_file')]}
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_inputnode -> tbss_1_preproc_prepfa;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_prepfa -> tbss_1_preproc_slicer;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_prepfa -> tbss_1_preproc_getmask1;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_prepfa -> tbss_1_preproc_outputnode;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_slicer -> tbss_1_preproc_outputnode;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_getmask1 -> tbss_1_preproc_getmask2;
121117-19:30:58,349 workflow DEBUG:
	 connection: tbss_1_preproc_getmask2 -> tbss_1_preproc_outputnode;
121117-19:30:58,395 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpUq999g.dot to png format
121117-19:30:58,409 workflow DEBUG:
	 connection: tbss_2_reg_inputnode -> tbss_2_reg_flirt;
121117-19:30:58,410 workflow DEBUG:
	 connection: tbss_2_reg_inputnode -> tbss_2_reg_fnirt;
121117-19:30:58,410 workflow DEBUG:
	 connection: tbss_2_reg_flirt -> tbss_2_reg_fnirt;
121117-19:30:58,410 workflow DEBUG:
	 connection: tbss_2_reg_fnirt -> tbss_2_reg_outputnode;
121117-19:30:58,447 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpNnhWOO.dot to png format
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_inputnode -> tbss_3_postreg_applywarp;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_applywarp -> tbss_3_postreg_mergefa;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_mergefa -> tbss_3_postreg_groupmask;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_mergefa -> tbss_3_postreg_maskgroup;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_groupmask -> tbss_3_postreg_maskgroup;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_groupmask -> tbss_3_postreg_outputnode;
121117-19:30:58,465 workflow DEBUG:
	 connection: tbss_3_postreg_maskgroup -> tbss_3_postreg_meanfa;
121117-19:30:58,466 workflow DEBUG:
	 connection: tbss_3_postreg_maskgroup -> tbss_3_postreg_outputnode;
121117-19:30:58,466 workflow DEBUG:
	 connection: tbss_3_postreg_meanfa -> tbss_3_postreg_makeskeleton;
121117-19:30:58,466 workflow DEBUG:
	 connection: tbss_3_postreg_meanfa -> tbss_3_postreg_outputnode;
121117-19:30:58,466 workflow DEBUG:
	 connection: tbss_3_postreg_makeskeleton -> tbss_3_postreg_outputnode;
121117-19:30:58,524 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmp6n6nKq.dot to png format
121117-19:30:58,539 workflow DEBUG:
	 connection: tbss_4_prestats_inputnode -> tbss_4_prestats_invertmask;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_inputnode -> tbss_4_prestats_skeletonmask;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_inputnode -> tbss_4_prestats_projectfa;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_skeletonmask -> tbss_4_prestats_invertmask;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_skeletonmask -> tbss_4_prestats_outputnode;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_invertmask -> tbss_4_prestats_distancemap;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_distancemap -> tbss_4_prestats_outputnode;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_distancemap -> tbss_4_prestats_projectfa;
121117-19:30:58,540 workflow DEBUG:
	 connection: tbss_4_prestats_projectfa -> tbss_4_prestats_outputnode;
121117-19:30:58,591 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpBUyf0J.dot to png format
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_inputnode -> tbss_all_tbss1_prepfa;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_prepfa -> tbss_all_tbss1_outputnode;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_prepfa -> tbss_all_tbss1_getmask1;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_prepfa -> tbss_all_tbss1_slicer;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_getmask1 -> tbss_all_tbss1_getmask2;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_getmask2 -> tbss_all_tbss1_outputnode;
121117-19:30:58,607 workflow DEBUG:
	 connection: tbss_all_tbss1_slicer -> tbss_all_tbss1_outputnode;
121117-19:30:58,608 workflow DEBUG:
	 connection: tbss_all_tbss2_inputnode -> tbss_all_tbss2_flirt;
121117-19:30:58,608 workflow DEBUG:
	 connection: tbss_all_tbss2_inputnode -> tbss_all_tbss2_fnirt;
121117-19:30:58,608 workflow DEBUG:
	 connection: tbss_all_tbss2_flirt -> tbss_all_tbss2_fnirt;
121117-19:30:58,608 workflow DEBUG:
	 connection: tbss_all_tbss2_fnirt -> tbss_all_tbss2_outputnode;
121117-19:30:58,608 workflow DEBUG:
	 connection: tbss_all_tbss3_inputnode -> tbss_all_tbss3_applywarp;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_applywarp -> tbss_all_tbss3_mergefa;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_mergefa -> tbss_all_tbss3_groupmask;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_mergefa -> tbss_all_tbss3_maskgroup;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_groupmask -> tbss_all_tbss3_maskgroup;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_groupmask -> tbss_all_tbss3_outputnode;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_maskgroup -> tbss_all_tbss3_meanfa;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_maskgroup -> tbss_all_tbss3_outputnode;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_meanfa -> tbss_all_tbss3_makeskeleton;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_meanfa -> tbss_all_tbss3_outputnode;
121117-19:30:58,609 workflow DEBUG:
	 connection: tbss_all_tbss3_makeskeleton -> tbss_all_tbss3_outputnode;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_inputnode -> tbss_all_tbss4_invertmask;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_inputnode -> tbss_all_tbss4_skeletonmask;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_inputnode -> tbss_all_tbss4_projectfa;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_skeletonmask -> tbss_all_tbss4_invertmask;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_skeletonmask -> tbss_all_tbss4_outputnode;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_invertmask -> tbss_all_tbss4_distancemap;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_distancemap -> tbss_all_tbss4_projectfa;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_distancemap -> tbss_all_tbss4_outputnode;
121117-19:30:58,610 workflow DEBUG:
	 connection: tbss_all_tbss4_projectfa -> tbss_all_tbss4_outputnode;
121117-19:30:58,610 workflow DEBUG:
	 cross connection: tbss_all_tbss1_outputnode -> tbss_all_tbss2_inputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss1_outputnode -> tbss_all_tbss2_inputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss1_outputnode -> tbss_all_outputall_node;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss1_outputnode -> tbss_all_outputall_node;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss1_outputnode -> tbss_all_tbss3_inputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputall_node;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputall_node;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputall_node;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss4_outputnode -> tbss_all_outputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_tbss4_inputnode;
121117-19:30:58,611 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_tbss4_inputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_tbss4_inputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_tbss4_inputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputall_node;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputall_node;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputall_node;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss3_outputnode -> tbss_all_outputall_node;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_inputnode -> tbss_all_tbss1_inputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_inputnode -> tbss_all_tbss4_inputnode;
121117-19:30:58,612 workflow DEBUG:
	 cross connection: tbss_all_tbss2_outputnode -> tbss_all_tbss3_inputnode;
121117-19:30:58,613 workflow DEBUG:
	 cross connection: tbss_all_tbss2_outputnode -> tbss_all_outputall_node;
121117-19:30:58,789 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpVs2lVu.dot to png format
121117-19:30:58,803 workflow DEBUG:
	 connection: tbss_non_FA_inputnode -> tbss_non_FA_applywarp;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_inputnode -> tbss_non_FA_projectfa;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_inputnode -> tbss_non_FA_maskgroup;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_applywarp -> tbss_non_FA_merge;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_merge -> tbss_non_FA_maskgroup;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_maskgroup -> tbss_non_FA_projectfa;
121117-19:30:58,804 workflow DEBUG:
	 connection: tbss_non_FA_projectfa -> tbss_non_FA_outputnode;
121117-19:30:58,853 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpw4BmZK.dot to png format
WARNING: Empty - nipype.workflows.dmri.mrtrix
121117-19:30:58,899 workflow DEBUG:
	 (eddycorrect.inputnode, eddycorrect.split): No edge data
121117-19:30:58,899 workflow DEBUG:
	 (eddycorrect.inputnode, eddycorrect.split): new edge data: {'connect': [('in_file', 'in_file')]}
121117-19:30:58,900 workflow DEBUG:
	 (eddycorrect.split, eddycorrect.pick_ref): No edge data
121117-19:30:58,900 workflow DEBUG:
	 (eddycorrect.split, eddycorrect.pick_ref): new edge data: {'connect': [('out_files', 'inlist')]}
121117-19:30:58,900 workflow DEBUG:
	 (eddycorrect.inputnode, eddycorrect.pick_ref): No edge data
121117-19:30:58,900 workflow DEBUG:
	 (eddycorrect.inputnode, eddycorrect.pick_ref): new edge data: {'connect': [('ref_num', 'index')]}
121117-19:30:58,903 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,904 workflow DEBUG:
	 (eddycorrect.split, eddycorrect.coregistration): No edge data
121117-19:30:58,905 workflow DEBUG:
	 (eddycorrect.split, eddycorrect.coregistration): new edge data: {'connect': [('out_files', 'in_file')]}
121117-19:30:58,905 workflow DEBUG:
	 (eddycorrect.pick_ref, eddycorrect.coregistration): No edge data
121117-19:30:58,905 workflow DEBUG:
	 (eddycorrect.pick_ref, eddycorrect.coregistration): new edge data: {'connect': [('out', 'reference')]}
121117-19:30:58,906 workflow DEBUG:
	 (eddycorrect.coregistration, eddycorrect.merge): No edge data
121117-19:30:58,906 workflow DEBUG:
	 (eddycorrect.coregistration, eddycorrect.merge): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:30:58,907 workflow DEBUG:
	 (eddycorrect.merge, eddycorrect.outputnode): No edge data
121117-19:30:58,907 workflow DEBUG:
	 (eddycorrect.merge, eddycorrect.outputnode): new edge data: {'connect': [('merged_file', 'eddy_corrected')]}
121117-19:30:58,913 workflow DEBUG:
	 setting nodelevel(eddycorrect.inputnode) input ref_num = 1
121117-19:30:58,945 workflow DEBUG:
	 (networkx.inputnode, networkx.NetworkXMetrics): No edge data
121117-19:30:58,945 workflow DEBUG:
	 (networkx.inputnode, networkx.NetworkXMetrics): new edge data: {'connect': [('network_file', 'in_file')]}
121117-19:30:58,946 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_node): No edge data
121117-19:30:58,946 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_node): new edge data: {'connect': [('node_measures_matlab', 'in_file')]}
121117-19:30:58,946 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_global): No edge data
121117-19:30:58,946 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.Matlab2CSV_global): new edge data: {'connect': [('global_measures_matlab', 'in_file')]}
121117-19:30:58,946 workflow DEBUG:
	 (networkx.Matlab2CSV_node, networkx.MergeCSVFiles_node): No edge data
121117-19:30:58,947 workflow DEBUG:
	 (networkx.Matlab2CSV_node, networkx.MergeCSVFiles_node): new edge data: {'connect': [('csv_files', 'in_files')]}
121117-19:30:58,947 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): No edge data
121117-19:30:58,947 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file')]}
121117-19:30:58,947 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): Edge data exists: {'connect': [('extra_field', 'out_file')]}
121117-19:30:58,947 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field')]}
121117-19:30:58,949 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): Edge data exists: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field')]}
121117-19:30:58,949 workflow DEBUG:
	 (networkx.inputnode, networkx.MergeCSVFiles_node): new edge data: {'connect': [('extra_field', 'out_file'), ('extra_field', 'extra_field'), (('network_file', 'S\'def pullnodeIDs(in_network, name_key=\\\'dn_name\\\'):\\n    """ This function will return the values contained, for each node in\\n    a network, given an input key. By default it will return the node names\\n    """\\n    import networkx as nx\\n    import numpy as np\\n    from nipype.interfaces.base import isdefined\\n    if not isdefined(in_network):\\n        raise ValueError\\n        return None\\n    try:\\n        ntwk = nx.read_graphml(in_network)\\n    except:\\n        ntwk = nx.read_gpickle(in_network)\\n    nodedata = ntwk.node\\n    ids = []\\n    integer_nodelist = []\\n    for node in nodedata.keys():\\n        integer_nodelist.append(int(node))\\n    for node in np.sort(integer_nodelist):\\n        try:\\n            nodeid = nodedata[node][name_key]\\n        except KeyError:\\n            nodeid = nodedata[str(node)][name_key]\\n        ids.append(nodeid)\\n    return ids\\n\'\n.', ()), 'row_headings')]}
121117-19:30:58,949 workflow DEBUG:
	 (networkx.inputnode, networkx.mergeNetworks): No edge data
121117-19:30:58,950 workflow DEBUG:
	 (networkx.inputnode, networkx.mergeNetworks): new edge data: {'connect': [('network_file', 'in1')]}
121117-19:30:58,950 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.mergeNetworks): No edge data
121117-19:30:58,950 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.mergeNetworks): new edge data: {'connect': [('gpickled_network_files', 'in2')]}
121117-19:30:58,951 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.outputnode): No edge data
121117-19:30:58,951 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.outputnode): new edge data: {'connect': [('csv_file', 'node_csv')]}
121117-19:30:58,952 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.outputnode): No edge data
121117-19:30:58,952 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.outputnode): new edge data: {'connect': [('csv_files', 'global_csv')]}
121117-19:30:58,952 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.mergeCSVs): No edge data
121117-19:30:58,952 workflow DEBUG:
	 (networkx.MergeCSVFiles_node, networkx.mergeCSVs): new edge data: {'connect': [('csv_file', 'in1')]}
121117-19:30:58,952 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.mergeCSVs): No edge data
121117-19:30:58,952 workflow DEBUG:
	 (networkx.Matlab2CSV_global, networkx.mergeCSVs): new edge data: {'connect': [('csv_files', 'in2')]}
121117-19:30:58,952 workflow DEBUG:
	 (networkx.mergeNetworks, networkx.outputnode): No edge data
121117-19:30:58,952 workflow DEBUG:
	 (networkx.mergeNetworks, networkx.outputnode): new edge data: {'connect': [('out', 'network_files')]}
121117-19:30:58,953 workflow DEBUG:
	 (networkx.mergeCSVs, networkx.outputnode): No edge data
121117-19:30:58,953 workflow DEBUG:
	 (networkx.mergeCSVs, networkx.outputnode): new edge data: {'connect': [('out', 'csv_files')]}
121117-19:30:58,953 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.outputnode): No edge data
121117-19:30:58,953 workflow DEBUG:
	 (networkx.NetworkXMetrics, networkx.outputnode): new edge data: {'connect': [('matlab_matrix_files', 'matlab_files')]}
121117-19:30:58,955 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.Matlab2CSV): No edge data
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.Matlab2CSV): new edge data: {'connect': [('matlab_matrix_files', 'in_file')]}
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.Matlab2CSV, cmats_to_csv.MergeCSVFiles): No edge data
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.Matlab2CSV, cmats_to_csv.MergeCSVFiles): new edge data: {'connect': [('csv_files', 'in_files')]}
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.MergeCSVFiles): No edge data
121117-19:30:58,957 workflow DEBUG:
	 (cmats_to_csv.inputnode, cmats_to_csv.MergeCSVFiles): new edge data: {'connect': [('extra_field', 'extra_field')]}
121117-19:30:58,958 workflow DEBUG:
	 (cmats_to_csv.MergeCSVFiles, cmats_to_csv.outputnode): No edge data
121117-19:30:58,958 workflow DEBUG:
	 (cmats_to_csv.MergeCSVFiles, cmats_to_csv.outputnode): new edge data: {'connect': [('csv_file', 'csv_file')]}
121117-19:30:58,961 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): No edge data
121117-19:30:58,961 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,961 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,961 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssource): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:58,962 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): No edge data
121117-19:30:58,962 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,962 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,962 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceLH): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:58,963 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): No edge data
121117-19:30:58,963 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,964 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,964 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fssourceRH): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:58,964 workflow DEBUG:
	 (mapping.inputnode_within, mapping.Parcellate): No edge data
121117-19:30:58,964 workflow DEBUG:
	 (mapping.inputnode_within, mapping.Parcellate): new edge data: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,965 workflow DEBUG:
	 (mapping.inputnode_within, mapping.Parcellate): Edge data exists: {'connect': [('subjects_dir', 'subjects_dir')]}
121117-19:30:58,965 workflow DEBUG:
	 (mapping.inputnode_within, mapping.Parcellate): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('subject_id', 'subject_id')]}
121117-19:30:58,965 workflow DEBUG:
	 (mapping.Parcellate, mapping.mri_convert_ROI_scale500): No edge data
121117-19:30:58,965 workflow DEBUG:
	 (mapping.Parcellate, mapping.mri_convert_ROI_scale500): new edge data: {'connect': [('roi_file', 'in_file')]}
121117-19:30:58,965 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_Brain): No edge data
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssource, mapping.mri_convert_Brain): new edge data: {'connect': [('brain', 'in_file')]}
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLH): No edge data
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLH): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRH): No edge data
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRH): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHwhite): No edge data
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHwhite): new edge data: {'connect': [('white', 'in_file')]}
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHwhite): No edge data
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHwhite): new edge data: {'connect': [('white', 'in_file')]}
121117-19:30:58,966 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHinflated): No edge data
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHinflated): new edge data: {'connect': [('inflated', 'in_file')]}
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHinflated): No edge data
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHinflated): new edge data: {'connect': [('inflated', 'in_file')]}
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHsphere): No edge data
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHsphere): new edge data: {'connect': [('sphere', 'in_file')]}
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHsphere): No edge data
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHsphere): new edge data: {'connect': [('sphere', 'in_file')]}
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): No edge data
121117-19:30:58,967 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:58,968 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): No edge data
121117-19:30:58,968 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): new edge data: {'connect': [('pial', 'in_file')]}
121117-19:30:58,968 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): Edge data exists: {'connect': [('pial', 'in_file')]}
121117-19:30:58,968 workflow DEBUG:
	 (mapping.fssourceLH, mapping.mris_convertLHlabels): new edge data: {'connect': [('pial', 'in_file'), (('annot', 'S"def select_aparc_annot(list_of_files):\\n    for in_file in list_of_files:\\n        if \'.aparc.annot\' in in_file:\\n            idx = list_of_files.index(in_file)\\n    return list_of_files[idx]\\n"\n.', ()), 'annot_file')]}
121117-19:30:58,969 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): Edge data exists: {'connect': [('pial', 'in_file')]}
121117-19:30:58,969 workflow DEBUG:
	 (mapping.fssourceRH, mapping.mris_convertRHlabels): new edge data: {'connect': [('pial', 'in_file'), (('annot', 'S"def select_aparc_annot(list_of_files):\\n    for in_file in list_of_files:\\n        if \'.aparc.annot\' in in_file:\\n            idx = list_of_files.index(in_file)\\n    return list_of_files[idx]\\n"\n.', ()), 'annot_file')]}
121117-19:30:58,970 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fsl2mrtrix): No edge data
121117-19:30:58,970 workflow DEBUG:
	 (mapping.inputnode_within, mapping.fsl2mrtrix): new edge data: {'connect': [('bvecs', 'bvec_file'), ('bvals', 'bval_file')]}
121117-19:30:58,977 workflow DEBUG:
	 (mapping.inputnode_within, mapping.eddycorrect): No edge data
121117-19:30:58,977 workflow DEBUG:
	 (mapping.inputnode_within, mapping.eddycorrect): new edge data: {'connect': [('dwi', 'inputnode.in_file')]}
121117-19:30:58,979 workflow DEBUG:
	 (mapping.eddycorrect, mapping.dwi2tensor): No edge data
121117-19:30:58,979 workflow DEBUG:
	 (mapping.eddycorrect, mapping.dwi2tensor): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,979 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.dwi2tensor): No edge data
121117-19:30:58,980 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.dwi2tensor): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2vector): No edge data
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2vector): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2adc): No edge data
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2adc): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2fa): No edge data
121117-19:30:58,980 workflow DEBUG:
	 (mapping.dwi2tensor, mapping.tensor2fa): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:30:58,981 workflow DEBUG:
	 (mapping.tensor2fa, mapping.MRmultiply_merge): No edge data
121117-19:30:58,981 workflow DEBUG:
	 (mapping.tensor2fa, mapping.MRmultiply_merge): new edge data: {'connect': [('FA', 'in1')]}
121117-19:30:58,981 workflow DEBUG:
	 (mapping.tensor2fa, mapping.MRconvert_fa): No edge data
121117-19:30:58,981 workflow DEBUG:
	 (mapping.tensor2fa, mapping.MRconvert_fa): new edge data: {'connect': [('FA', 'in_file')]}
121117-19:30:58,984 workflow DEBUG:
	 (mapping.eddycorrect, mapping.MRconvert): No edge data
121117-19:30:58,984 workflow DEBUG:
	 (mapping.eddycorrect, mapping.MRconvert): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,984 workflow DEBUG:
	 (mapping.MRconvert, mapping.threshold_b0): No edge data
121117-19:30:58,984 workflow DEBUG:
	 (mapping.MRconvert, mapping.threshold_b0): new edge data: {'connect': [('converted', 'in_file')]}
121117-19:30:58,984 workflow DEBUG:
	 (mapping.threshold_b0, mapping.median3d): No edge data
121117-19:30:58,984 workflow DEBUG:
	 (mapping.threshold_b0, mapping.median3d): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,985 workflow DEBUG:
	 (mapping.median3d, mapping.erode_mask_firstpass): No edge data
121117-19:30:58,985 workflow DEBUG:
	 (mapping.median3d, mapping.erode_mask_firstpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,985 workflow DEBUG:
	 (mapping.erode_mask_firstpass, mapping.erode_mask_secondpass): No edge data
121117-19:30:58,985 workflow DEBUG:
	 (mapping.erode_mask_firstpass, mapping.erode_mask_secondpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,985 workflow DEBUG:
	 (mapping.erode_mask_secondpass, mapping.MRmultiply_merge): No edge data
121117-19:30:58,985 workflow DEBUG:
	 (mapping.erode_mask_secondpass, mapping.MRmultiply_merge): new edge data: {'connect': [('out_file', 'in2')]}
121117-19:30:58,985 workflow DEBUG:
	 (mapping.MRmultiply_merge, mapping.MRmultiply): No edge data
121117-19:30:58,986 workflow DEBUG:
	 (mapping.MRmultiply_merge, mapping.MRmultiply): new edge data: {'connect': [('out', 'in_files')]}
121117-19:30:58,986 workflow DEBUG:
	 (mapping.MRmultiply, mapping.threshold_FA): No edge data
121117-19:30:58,986 workflow DEBUG:
	 (mapping.MRmultiply, mapping.threshold_FA): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:58,989 workflow DEBUG:
	 (mapping.eddycorrect, mapping.bet_b0): No edge data
121117-19:30:58,989 workflow DEBUG:
	 (mapping.eddycorrect, mapping.bet_b0): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,991 workflow DEBUG:
	 (mapping.eddycorrect, mapping.gen_WM_mask): No edge data
121117-19:30:58,991 workflow DEBUG:
	 (mapping.eddycorrect, mapping.gen_WM_mask): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,992 workflow DEBUG:
	 (mapping.bet_b0, mapping.gen_WM_mask): No edge data
121117-19:30:58,992 workflow DEBUG:
	 (mapping.bet_b0, mapping.gen_WM_mask): new edge data: {'connect': [('mask_file', 'binary_mask')]}
121117-19:30:58,992 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.gen_WM_mask): No edge data
121117-19:30:58,992 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.gen_WM_mask): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:30:58,992 workflow DEBUG:
	 (mapping.gen_WM_mask, mapping.threshold_wmmask): No edge data
121117-19:30:58,992 workflow DEBUG:
	 (mapping.gen_WM_mask, mapping.threshold_wmmask): new edge data: {'connect': [('WMprobabilitymap', 'in_file')]}
121117-19:30:58,995 workflow DEBUG:
	 (mapping.eddycorrect, mapping.estimateresponse): No edge data
121117-19:30:58,995 workflow DEBUG:
	 (mapping.eddycorrect, mapping.estimateresponse): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,995 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.estimateresponse): No edge data
121117-19:30:58,996 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.estimateresponse): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:30:58,996 workflow DEBUG:
	 (mapping.threshold_FA, mapping.estimateresponse): No edge data
121117-19:30:58,996 workflow DEBUG:
	 (mapping.threshold_FA, mapping.estimateresponse): new edge data: {'connect': [('out_file', 'mask_image')]}
121117-19:30:58,998 workflow DEBUG:
	 (mapping.eddycorrect, mapping.csdeconv): No edge data
121117-19:30:58,999 workflow DEBUG:
	 (mapping.eddycorrect, mapping.csdeconv): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:58,999 workflow DEBUG:
	 (mapping.gen_WM_mask, mapping.csdeconv): No edge data
121117-19:30:58,999 workflow DEBUG:
	 (mapping.gen_WM_mask, mapping.csdeconv): new edge data: {'connect': [('WMprobabilitymap', 'mask_image')]}
121117-19:30:58,999 workflow DEBUG:
	 (mapping.estimateresponse, mapping.csdeconv): No edge data
121117-19:30:58,999 workflow DEBUG:
	 (mapping.estimateresponse, mapping.csdeconv): new edge data: {'connect': [('response', 'response_file')]}
121117-19:30:58,999 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.csdeconv): No edge data
121117-19:30:58,999 workflow DEBUG:
	 (mapping.fsl2mrtrix, mapping.csdeconv): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:30:59,0 workflow DEBUG:
	 (mapping.threshold_wmmask, mapping.probCSDstreamtrack): No edge data
121117-19:30:59,0 workflow DEBUG:
	 (mapping.threshold_wmmask, mapping.probCSDstreamtrack): new edge data: {'connect': [('out_file', 'seed_file')]}
121117-19:30:59,0 workflow DEBUG:
	 (mapping.csdeconv, mapping.probCSDstreamtrack): No edge data
121117-19:30:59,0 workflow DEBUG:
	 (mapping.csdeconv, mapping.probCSDstreamtrack): new edge data: {'connect': [('spherical_harmonics_image', 'in_file')]}
121117-19:30:59,0 workflow DEBUG:
	 (mapping.probCSDstreamtrack, mapping.tracks2prob): No edge data
121117-19:30:59,0 workflow DEBUG:
	 (mapping.probCSDstreamtrack, mapping.tracks2prob): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:30:59,3 workflow DEBUG:
	 (mapping.eddycorrect, mapping.tracks2prob): No edge data
121117-19:30:59,3 workflow DEBUG:
	 (mapping.eddycorrect, mapping.tracks2prob): new edge data: {'connect': [('outputnode.eddy_corrected', 'template_file')]}
121117-19:30:59,3 workflow DEBUG:
	 (mapping.tracks2prob, mapping.MRconvert_tracks2prob): No edge data
121117-19:30:59,3 workflow DEBUG:
	 (mapping.tracks2prob, mapping.MRconvert_tracks2prob): new edge data: {'connect': [('tract_image', 'in_file')]}
121117-19:30:59,6 workflow DEBUG:
	 (mapping.eddycorrect, mapping.coregister): No edge data
121117-19:30:59,6 workflow DEBUG:
	 (mapping.eddycorrect, mapping.coregister): new edge data: {'connect': [('outputnode.eddy_corrected', 'in_file')]}
121117-19:30:59,7 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.coregister): No edge data
121117-19:30:59,7 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.coregister): new edge data: {'connect': [('out_file', 'reference')]}
121117-19:30:59,9 workflow DEBUG:
	 (mapping.eddycorrect, mapping.tck2trk): No edge data
121117-19:30:59,9 workflow DEBUG:
	 (mapping.eddycorrect, mapping.tck2trk): new edge data: {'connect': [('outputnode.eddy_corrected', 'image_file')]}
121117-19:30:59,10 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.tck2trk): No edge data
121117-19:30:59,10 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.tck2trk): new edge data: {'connect': [('out_file', 'registration_image_file')]}
121117-19:30:59,10 workflow DEBUG:
	 (mapping.coregister, mapping.tck2trk): No edge data
121117-19:30:59,10 workflow DEBUG:
	 (mapping.coregister, mapping.tck2trk): new edge data: {'connect': [('out_matrix_file', 'matrix_file')]}
121117-19:30:59,10 workflow DEBUG:
	 (mapping.probCSDstreamtrack, mapping.tck2trk): No edge data
121117-19:30:59,10 workflow DEBUG:
	 (mapping.probCSDstreamtrack, mapping.tck2trk): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:30:59,11 workflow DEBUG:
	 (mapping.tck2trk, mapping.CreateMatrix): No edge data
121117-19:30:59,11 workflow DEBUG:
	 (mapping.tck2trk, mapping.CreateMatrix): new edge data: {'connect': [('out_file', 'tract_file')]}
121117-19:30:59,11 workflow DEBUG:
	 (mapping.tck2trk, mapping.trk2tdi): No edge data
121117-19:30:59,11 workflow DEBUG:
	 (mapping.tck2trk, mapping.trk2tdi): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:30:59,12 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): No edge data
121117-19:30:59,12 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): new edge data: {'connect': [('resolution_network_file', 'resolution_network_file')]}
121117-19:30:59,12 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): Edge data exists: {'connect': [('resolution_network_file', 'resolution_network_file')]}
121117-19:30:59,12 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): new edge data: {'connect': [('resolution_network_file', 'resolution_network_file'), ('subject_id', 'out_matrix_file')]}
121117-19:30:59,13 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): Edge data exists: {'connect': [('resolution_network_file', 'resolution_network_file'), ('subject_id', 'out_matrix_file')]}
121117-19:30:59,13 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CreateMatrix): new edge data: {'connect': [('resolution_network_file', 'resolution_network_file'), ('subject_id', 'out_matrix_file'), ('subject_id', 'out_matrix_mat_file')]}
121117-19:30:59,13 workflow DEBUG:
	 (mapping.Parcellate, mapping.CreateMatrix): No edge data
121117-19:30:59,13 workflow DEBUG:
	 (mapping.Parcellate, mapping.CreateMatrix): new edge data: {'connect': [('roi_file', 'roi_file')]}
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertLH, mapping.GiftiSurfaces): No edge data
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertLH, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in1')]}
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertRH, mapping.GiftiSurfaces): No edge data
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertRH, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in2')]}
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertLHwhite, mapping.GiftiSurfaces): No edge data
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertLHwhite, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in3')]}
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertRHwhite, mapping.GiftiSurfaces): No edge data
121117-19:30:59,14 workflow DEBUG:
	 (mapping.mris_convertRHwhite, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in4')]}
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertLHinflated, mapping.GiftiSurfaces): No edge data
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertLHinflated, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in5')]}
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertRHinflated, mapping.GiftiSurfaces): No edge data
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertRHinflated, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in6')]}
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertLHsphere, mapping.GiftiSurfaces): No edge data
121117-19:30:59,15 workflow DEBUG:
	 (mapping.mris_convertLHsphere, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in7')]}
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertRHsphere, mapping.GiftiSurfaces): No edge data
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertRHsphere, mapping.GiftiSurfaces): new edge data: {'connect': [('converted', 'in8')]}
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertLHlabels, mapping.GiftiLabels): No edge data
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertLHlabels, mapping.GiftiLabels): new edge data: {'connect': [('converted', 'in1')]}
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertRHlabels, mapping.GiftiLabels): No edge data
121117-19:30:59,16 workflow DEBUG:
	 (mapping.mris_convertRHlabels, mapping.GiftiLabels): new edge data: {'connect': [('converted', 'in2')]}
121117-19:30:59,17 workflow DEBUG:
	 (mapping.Parcellate, mapping.NiftiVolumes): No edge data
121117-19:30:59,17 workflow DEBUG:
	 (mapping.Parcellate, mapping.NiftiVolumes): new edge data: {'connect': [('roi_file', 'in1')]}
121117-19:30:59,19 workflow DEBUG:
	 (mapping.eddycorrect, mapping.NiftiVolumes): No edge data
121117-19:30:59,19 workflow DEBUG:
	 (mapping.eddycorrect, mapping.NiftiVolumes): new edge data: {'connect': [('outputnode.eddy_corrected', 'in2')]}
121117-19:30:59,20 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.NiftiVolumes): No edge data
121117-19:30:59,20 workflow DEBUG:
	 (mapping.mri_convert_Brain, mapping.NiftiVolumes): new edge data: {'connect': [('out_file', 'in3')]}
121117-19:30:59,20 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): No edge data
121117-19:30:59,20 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1')]}
121117-19:30:59,21 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1')]}
121117-19:30:59,21 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2')]}
121117-19:30:59,21 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2')]}
121117-19:30:59,21 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3')]}
121117-19:30:59,22 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): Edge data exists: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3')]}
121117-19:30:59,22 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.FiberDataArrays): new edge data: {'connect': [('endpoint_file', 'in1'), ('endpoint_file_mm', 'in2'), ('fiber_length_file', 'in3'), ('fiber_label_file', 'in4')]}
121117-19:30:59,22 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.CFFConverter): No edge data
121117-19:30:59,22 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.CFFConverter): new edge data: {'connect': [('out', 'gifti_surfaces')]}
121117-19:30:59,22 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.CFFConverter): No edge data
121117-19:30:59,22 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.CFFConverter): new edge data: {'connect': [('out', 'gifti_labels')]}
121117-19:30:59,23 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): No edge data
121117-19:30:59,23 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): new edge data: {'connect': [('matrix_files', 'gpickled_networks')]}
121117-19:30:59,23 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.CFFConverter): No edge data
121117-19:30:59,23 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.CFFConverter): new edge data: {'connect': [('out', 'nifti_volumes')]}
121117-19:30:59,23 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.CFFConverter): No edge data
121117-19:30:59,24 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.CFFConverter): new edge data: {'connect': [('out', 'data_files')]}
121117-19:30:59,24 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): Edge data exists: {'connect': [('matrix_files', 'gpickled_networks')]}
121117-19:30:59,24 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.CFFConverter): new edge data: {'connect': [('matrix_files', 'gpickled_networks'), ('filtered_tractographies', 'tract_files')]}
121117-19:30:59,25 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CFFConverter): No edge data
121117-19:30:59,25 workflow DEBUG:
	 (mapping.inputnode_within, mapping.CFFConverter): new edge data: {'connect': [('subject_id', 'title')]}
121117-19:30:59,28 workflow DEBUG:
	 (mapping.inputnode_within, mapping.networkx): No edge data
121117-19:30:59,28 workflow DEBUG:
	 (mapping.inputnode_within, mapping.networkx): new edge data: {'connect': [('subject_id', 'inputnode.extra_field')]}
121117-19:30:59,31 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.networkx): No edge data
121117-19:30:59,31 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.networkx): new edge data: {'connect': [('intersection_matrix_file', 'inputnode.network_file')]}
121117-19:30:59,36 workflow DEBUG:
	 (mapping.networkx, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,36 workflow DEBUG:
	 (mapping.networkx, mapping.NxStatsCFFConverter): new edge data: {'connect': [('outputnode.network_files', 'gpickled_networks')]}
121117-19:30:59,36 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,37 workflow DEBUG:
	 (mapping.GiftiSurfaces, mapping.NxStatsCFFConverter): new edge data: {'connect': [('out', 'gifti_surfaces')]}
121117-19:30:59,37 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,37 workflow DEBUG:
	 (mapping.GiftiLabels, mapping.NxStatsCFFConverter): new edge data: {'connect': [('out', 'gifti_labels')]}
121117-19:30:59,37 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,37 workflow DEBUG:
	 (mapping.NiftiVolumes, mapping.NxStatsCFFConverter): new edge data: {'connect': [('out', 'nifti_volumes')]}
121117-19:30:59,37 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,38 workflow DEBUG:
	 (mapping.FiberDataArrays, mapping.NxStatsCFFConverter): new edge data: {'connect': [('out', 'data_files')]}
121117-19:30:59,38 workflow DEBUG:
	 (mapping.inputnode_within, mapping.NxStatsCFFConverter): No edge data
121117-19:30:59,38 workflow DEBUG:
	 (mapping.inputnode_within, mapping.NxStatsCFFConverter): new edge data: {'connect': [('subject_id', 'title')]}
121117-19:30:59,40 workflow DEBUG:
	 (mapping.inputnode_within, mapping.cmats_to_csv): No edge data
121117-19:30:59,40 workflow DEBUG:
	 (mapping.inputnode_within, mapping.cmats_to_csv): new edge data: {'connect': [('subject_id', 'inputnode.extra_field')]}
121117-19:30:59,41 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.cmats_to_csv): No edge data
121117-19:30:59,42 workflow DEBUG:
	 (mapping.CreateMatrix, mapping.cmats_to_csv): new edge data: {'connect': [('matlab_matrix_files', 'inputnode.matlab_matrix_files')]}
121117-19:30:59,335 workflow DEBUG:
	 (connectivity.inputnode, connectivity.mapping): No edge data
121117-19:30:59,335 workflow DEBUG:
	 (connectivity.inputnode, connectivity.mapping): new edge data: {'connect': [('dwi', 'inputnode_within.dwi'), ('bvals', 'inputnode_within.bvals'), ('bvecs', 'inputnode_within.bvecs'), ('subject_id', 'inputnode_within.subject_id'), ('subjects_dir', 'inputnode_within.subjects_dir')]}
121117-19:30:59,879 workflow DEBUG:
	 (connectivity.mapping, connectivity.outputnode): No edge data
121117-19:30:59,879 workflow DEBUG:
	 (connectivity.mapping, connectivity.outputnode): new edge data: {'connect': [('tck2trk.out_file', 'tracts'), ('CFFConverter.connectome_file', 'connectome'), ('NxStatsCFFConverter.connectome_file', 'nxstatscff'), ('CreateMatrix.matrix_mat_file', 'cmatrix'), ('CreateMatrix.mean_fiber_length_matrix_mat_file', 'mean_fiber_length'), ('CreateMatrix.median_fiber_length_matrix_mat_file', 'median_fiber_length'), ('CreateMatrix.fiber_length_std_matrix_mat_file', 'fiber_length_std'), ('CreateMatrix.matrix_files', 'networks'), ('CreateMatrix.filtered_tractography', 'filtered_tracts'), ('mri_convert_ROI_scale500.out_file', 'rois'), ('trk2tdi.out_file', 'tdi'), ('csdeconv.spherical_harmonics_image', 'odfs'), ('mri_convert_Brain.out_file', 'struct'), ('MRconvert_fa.converted', 'fa'), ('MRconvert_tracks2prob.converted', 'tracks2prob')]}
121117-19:30:59,881 workflow DEBUG:
	 (mapping.cmats_to_csv, connectivity.outputnode): No edge data
121117-19:30:59,881 workflow DEBUG:
	 (mapping.cmats_to_csv, connectivity.outputnode): new edge data: {'connect': [('outputnode.csv_file', 'cmatrices_csv')]}
121117-19:30:59,886 workflow DEBUG:
	 (mapping.networkx, connectivity.outputnode): No edge data
121117-19:30:59,886 workflow DEBUG:
	 (mapping.networkx, connectivity.outputnode): new edge data: {'connect': [('outputnode.csv_files', 'nxcsv')]}
121117-19:30:59,924 workflow DEBUG:
	 connection: connectivity_cmats_to_csv_inputnode -> connectivity_cmats_to_csv_Matlab2CSV;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_cmats_to_csv_inputnode -> connectivity_cmats_to_csv_MergeCSVFiles;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_cmats_to_csv_Matlab2CSV -> connectivity_cmats_to_csv_MergeCSVFiles;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_cmats_to_csv_MergeCSVFiles -> connectivity_cmats_to_csv_outputnode;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_networkx_inputnode -> connectivity_networkx_MergeCSVFiles_node;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_networkx_inputnode -> connectivity_networkx_NetworkXMetrics;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_networkx_inputnode -> connectivity_networkx_mergeNetworks;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_networkx_NetworkXMetrics -> connectivity_networkx_outputnode;
121117-19:30:59,925 workflow DEBUG:
	 connection: connectivity_networkx_NetworkXMetrics -> connectivity_networkx_mergeNetworks;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_NetworkXMetrics -> connectivity_networkx_Matlab2CSV_node;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_NetworkXMetrics -> connectivity_networkx_Matlab2CSV_global;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_Matlab2CSV_node -> connectivity_networkx_MergeCSVFiles_node;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_mergeNetworks -> connectivity_networkx_outputnode;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_MergeCSVFiles_node -> connectivity_networkx_outputnode;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_MergeCSVFiles_node -> connectivity_networkx_mergeCSVs;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_Matlab2CSV_global -> connectivity_networkx_outputnode;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_Matlab2CSV_global -> connectivity_networkx_mergeCSVs;
121117-19:30:59,926 workflow DEBUG:
	 connection: connectivity_networkx_mergeCSVs -> connectivity_networkx_outputnode;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_Parcellate;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssourceLH;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_CFFConverter;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssourceRH;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fssource;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,928 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_CreateMatrix;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_inputnode_within -> connectivity_mapping_fsl2mrtrix;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_inputnode -> connectivity_mapping_eddycorrect_split;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_inputnode -> connectivity_mapping_eddycorrect_pick_ref;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_split -> connectivity_mapping_eddycorrect_pick_ref;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_split -> connectivity_mapping_eddycorrect_coregistration;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_pick_ref -> connectivity_mapping_eddycorrect_coregistration;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_coregistration -> connectivity_mapping_eddycorrect_merge;
121117-19:30:59,929 workflow DEBUG:
	 connection: connectivity_mapping_eddycorrect_merge -> connectivity_mapping_eddycorrect_outputnode;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_MRconvert -> connectivity_mapping_threshold_b0;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_threshold_b0 -> connectivity_mapping_median3d;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_median3d -> connectivity_mapping_erode_mask_firstpass;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_Parcellate -> connectivity_mapping_CreateMatrix;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_Parcellate -> connectivity_mapping_mri_convert_ROI_scale500;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_Parcellate -> connectivity_mapping_NiftiVolumes;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_erode_mask_firstpass -> connectivity_mapping_erode_mask_secondpass;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssource -> connectivity_mapping_mri_convert_Brain;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRH;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHlabels;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHsphere;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHinflated;
121117-19:30:59,930 workflow DEBUG:
	 connection: connectivity_mapping_fssourceRH -> connectivity_mapping_mris_convertRHwhite;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRH -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHlabels -> connectivity_mapping_GiftiLabels;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHsphere -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHinflated -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_erode_mask_secondpass -> connectivity_mapping_MRmultiply_merge;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLH;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHinflated;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHsphere;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHlabels;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_fssourceLH -> connectivity_mapping_mris_convertLHwhite;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLH -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHinflated -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,931 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHsphere -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHlabels -> connectivity_mapping_GiftiLabels;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_GiftiLabels -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_GiftiLabels -> connectivity_mapping_CFFConverter;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertLHwhite -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_tck2trk;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_coregister;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_mri_convert_Brain -> connectivity_mapping_NiftiVolumes;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_NiftiVolumes -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_NiftiVolumes -> connectivity_mapping_CFFConverter;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_coregister -> connectivity_mapping_tck2trk;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_fsl2mrtrix -> connectivity_mapping_csdeconv;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_fsl2mrtrix -> connectivity_mapping_estimateresponse;
121117-19:30:59,932 workflow DEBUG:
	 connection: connectivity_mapping_fsl2mrtrix -> connectivity_mapping_dwi2tensor;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_fsl2mrtrix -> connectivity_mapping_gen_WM_mask;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_dwi2tensor -> connectivity_mapping_tensor2vector;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_dwi2tensor -> connectivity_mapping_tensor2adc;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_dwi2tensor -> connectivity_mapping_tensor2fa;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_mris_convertRHwhite -> connectivity_mapping_GiftiSurfaces;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_tensor2fa -> connectivity_mapping_MRmultiply_merge;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_tensor2fa -> connectivity_mapping_MRconvert_fa;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_MRmultiply_merge -> connectivity_mapping_MRmultiply;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_MRmultiply -> connectivity_mapping_threshold_FA;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_threshold_FA -> connectivity_mapping_estimateresponse;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_estimateresponse -> connectivity_mapping_csdeconv;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_GiftiSurfaces -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,933 workflow DEBUG:
	 connection: connectivity_mapping_GiftiSurfaces -> connectivity_mapping_CFFConverter;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_bet_b0 -> connectivity_mapping_gen_WM_mask;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_gen_WM_mask -> connectivity_mapping_csdeconv;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_gen_WM_mask -> connectivity_mapping_threshold_wmmask;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_csdeconv -> connectivity_mapping_probCSDstreamtrack;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_threshold_wmmask -> connectivity_mapping_probCSDstreamtrack;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_probCSDstreamtrack -> connectivity_mapping_tracks2prob;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_probCSDstreamtrack -> connectivity_mapping_tck2trk;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_tracks2prob -> connectivity_mapping_MRconvert_tracks2prob;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_tck2trk -> connectivity_mapping_CreateMatrix;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_tck2trk -> connectivity_mapping_trk2tdi;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_FiberDataArrays;
121117-19:30:59,934 workflow DEBUG:
	 connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_CFFConverter;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_cmats_to_csv_inputnode -> connectivity_mapping_cmats_to_csv_Matlab2CSV;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_cmats_to_csv_inputnode -> connectivity_mapping_cmats_to_csv_MergeCSVFiles;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_cmats_to_csv_Matlab2CSV -> connectivity_mapping_cmats_to_csv_MergeCSVFiles;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_cmats_to_csv_MergeCSVFiles -> connectivity_mapping_cmats_to_csv_outputnode;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_inputnode -> connectivity_mapping_networkx_MergeCSVFiles_node;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_inputnode -> connectivity_mapping_networkx_NetworkXMetrics;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_inputnode -> connectivity_mapping_networkx_mergeNetworks;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_NetworkXMetrics -> connectivity_mapping_networkx_outputnode;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_NetworkXMetrics -> connectivity_mapping_networkx_mergeNetworks;
121117-19:30:59,935 workflow DEBUG:
	 connection: connectivity_mapping_networkx_NetworkXMetrics -> connectivity_mapping_networkx_Matlab2CSV_node;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_NetworkXMetrics -> connectivity_mapping_networkx_Matlab2CSV_global;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_Matlab2CSV_node -> connectivity_mapping_networkx_MergeCSVFiles_node;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_mergeNetworks -> connectivity_mapping_networkx_outputnode;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_MergeCSVFiles_node -> connectivity_mapping_networkx_outputnode;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_MergeCSVFiles_node -> connectivity_mapping_networkx_mergeCSVs;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_Matlab2CSV_global -> connectivity_mapping_networkx_outputnode;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_Matlab2CSV_global -> connectivity_mapping_networkx_mergeCSVs;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_networkx_mergeCSVs -> connectivity_mapping_networkx_outputnode;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_FiberDataArrays -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,936 workflow DEBUG:
	 connection: connectivity_mapping_FiberDataArrays -> connectivity_mapping_CFFConverter;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_networkx_outputnode -> connectivity_mapping_NxStatsCFFConverter;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_cmats_to_csv_inputnode;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_mapping_networkx_inputnode;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_bet_b0;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_coregister;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_tck2trk;
121117-19:30:59,937 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_dwi2tensor;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_NiftiVolumes;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_csdeconv;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_estimateresponse;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_tracks2prob;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_MRconvert;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_eddycorrect_outputnode -> connectivity_mapping_gen_WM_mask;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_inputnode_within -> connectivity_mapping_cmats_to_csv_inputnode;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_inputnode_within -> connectivity_mapping_eddycorrect_inputnode;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_mapping_inputnode_within -> connectivity_mapping_networkx_inputnode;
121117-19:30:59,938 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_inputnode -> connectivity_mapping_inputnode_within;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: mapping_networkx_outputnode -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: mapping_cmats_to_csv_outputnode -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_tck2trk -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_CFFConverter -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_NxStatsCFFConverter -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,939 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_CreateMatrix -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_mri_convert_ROI_scale500 -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_trk2tdi -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_csdeconv -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_mri_convert_Brain -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_MRconvert_fa -> connectivity_outputnode;
121117-19:30:59,940 workflow DEBUG:
	 cross connection: connectivity_mapping_MRconvert_tracks2prob -> connectivity_outputnode;
121117-19:31:01,413 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpOok_Hg.dot to png format
121117-19:31:01,440 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.fsl2mrtrix): No edge data
121117-19:31:01,440 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.fsl2mrtrix): new edge data: {'connect': [('bvecs', 'bvec_file'), ('bvals', 'bval_file')]}
121117-19:31:01,440 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.dwi2tensor): No edge data
121117-19:31:01,440 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.dwi2tensor): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.dwi2tensor): No edge data
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.dwi2tensor): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2vector): No edge data
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2vector): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2adc): No edge data
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2adc): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2fa): No edge data
121117-19:31:01,441 workflow DEBUG:
	 (dtiproc.dwi2tensor, dtiproc.tensor2fa): new edge data: {'connect': [['tensor', 'in_file']]}
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.MRconvert): No edge data
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.MRconvert): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.MRconvert, dtiproc.threshold_b0): No edge data
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.MRconvert, dtiproc.threshold_b0): new edge data: {'connect': [('converted', 'in_file')]}
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.threshold_b0, dtiproc.median3D): No edge data
121117-19:31:01,442 workflow DEBUG:
	 (dtiproc.threshold_b0, dtiproc.median3D): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.median3D, dtiproc.erode_mask_firstpass): No edge data
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.median3D, dtiproc.erode_mask_firstpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.erode_mask_firstpass, dtiproc.erode_mask_secondpass): No edge data
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.erode_mask_firstpass, dtiproc.erode_mask_secondpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.tensor2fa, dtiproc.MRmultiply_merge): No edge data
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.tensor2fa, dtiproc.MRmultiply_merge): new edge data: {'connect': [('FA', 'in1')]}
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.erode_mask_secondpass, dtiproc.MRmultiply_merge): No edge data
121117-19:31:01,443 workflow DEBUG:
	 (dtiproc.erode_mask_secondpass, dtiproc.MRmultiply_merge): new edge data: {'connect': [('out_file', 'in2')]}
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.MRmultiply_merge, dtiproc.MRmultiply): No edge data
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.MRmultiply_merge, dtiproc.MRmultiply): new edge data: {'connect': [('out', 'in_files')]}
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.MRmultiply, dtiproc.threshold_FA): No edge data
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.MRmultiply, dtiproc.threshold_FA): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.threshold_FA, dtiproc.estimateresponse): No edge data
121117-19:31:01,444 workflow DEBUG:
	 (dtiproc.threshold_FA, dtiproc.estimateresponse): new edge data: {'connect': [('out_file', 'mask_image')]}
121117-19:31:01,445 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.bet): No edge data
121117-19:31:01,445 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.bet): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,445 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.gen_WM_mask): No edge data
121117-19:31:01,445 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.gen_WM_mask): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,445 workflow DEBUG:
	 (dtiproc.bet, dtiproc.gen_WM_mask): No edge data
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.bet, dtiproc.gen_WM_mask): new edge data: {'connect': [('mask_file', 'binary_mask')]}
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.gen_WM_mask): No edge data
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.gen_WM_mask): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.estimateresponse): No edge data
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.estimateresponse): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,446 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.estimateresponse): No edge data
121117-19:31:01,447 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.estimateresponse): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:31:01,447 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.csdeconv): No edge data
121117-19:31:01,447 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.csdeconv): new edge data: {'connect': [('dwi', 'in_file')]}
121117-19:31:01,447 workflow DEBUG:
	 (dtiproc.gen_WM_mask, dtiproc.csdeconv): No edge data
121117-19:31:01,447 workflow DEBUG:
	 (dtiproc.gen_WM_mask, dtiproc.csdeconv): new edge data: {'connect': [('WMprobabilitymap', 'mask_image')]}
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.estimateresponse, dtiproc.csdeconv): No edge data
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.estimateresponse, dtiproc.csdeconv): new edge data: {'connect': [('response', 'response_file')]}
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.csdeconv): No edge data
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.fsl2mrtrix, dtiproc.csdeconv): new edge data: {'connect': [('encoding_file', 'encoding_file')]}
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.gen_WM_mask, dtiproc.threshold_wmmask): No edge data
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.gen_WM_mask, dtiproc.threshold_wmmask): new edge data: {'connect': [('WMprobabilitymap', 'in_file')]}
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.threshold_wmmask, dtiproc.CSDstreamtrack): No edge data
121117-19:31:01,448 workflow DEBUG:
	 (dtiproc.threshold_wmmask, dtiproc.CSDstreamtrack): new edge data: {'connect': [('out_file', 'seed_file')]}
121117-19:31:01,449 workflow DEBUG:
	 (dtiproc.csdeconv, dtiproc.CSDstreamtrack): No edge data
121117-19:31:01,449 workflow DEBUG:
	 (dtiproc.csdeconv, dtiproc.CSDstreamtrack): new edge data: {'connect': [('spherical_harmonics_image', 'in_file')]}
121117-19:31:01,449 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.tracks2prob): No edge data
121117-19:31:01,449 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.tracks2prob): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:31:01,449 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tracks2prob): No edge data
121117-19:31:01,450 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tracks2prob): new edge data: {'connect': [('dwi', 'template_file')]}
121117-19:31:01,450 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.tck2trk): No edge data
121117-19:31:01,450 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.tck2trk): new edge data: {'connect': [('tracked', 'in_file')]}
121117-19:31:01,450 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tck2trk): No edge data
121117-19:31:01,450 workflow DEBUG:
	 (dtiproc.inputnode, dtiproc.tck2trk): new edge data: {'connect': [('dwi', 'image_file')]}
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.outputnode): No edge data
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.CSDstreamtrack, dtiproc.outputnode): new edge data: {'connect': [('tracked', 'tracts_tck')]}
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.csdeconv, dtiproc.outputnode): No edge data
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.csdeconv, dtiproc.outputnode): new edge data: {'connect': [('spherical_harmonics_image', 'csdeconv')]}
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.tensor2fa, dtiproc.outputnode): No edge data
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.tensor2fa, dtiproc.outputnode): new edge data: {'connect': [('FA', 'fa')]}
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.tck2trk, dtiproc.outputnode): No edge data
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.tck2trk, dtiproc.outputnode): new edge data: {'connect': [('out_file', 'tracts_trk')]}
121117-19:31:01,452 workflow DEBUG:
	 (dtiproc.tracks2prob, dtiproc.outputnode): No edge data
121117-19:31:01,453 workflow DEBUG:
	 (dtiproc.tracks2prob, dtiproc.outputnode): new edge data: {'connect': [('tract_image', 'tdi')]}
121117-19:31:01,475 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_csdeconv;
121117-19:31:01,475 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_estimateresponse;
121117-19:31:01,475 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_tracks2prob;
121117-19:31:01,475 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_dwi2tensor;
121117-19:31:01,475 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_fsl2mrtrix;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_tck2trk;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_MRconvert;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_gen_WM_mask;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_inputnode -> dtiproc_bet;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_fsl2mrtrix -> dtiproc_dwi2tensor;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_fsl2mrtrix -> dtiproc_csdeconv;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_fsl2mrtrix -> dtiproc_gen_WM_mask;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_fsl2mrtrix -> dtiproc_estimateresponse;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_dwi2tensor -> dtiproc_tensor2adc;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_dwi2tensor -> dtiproc_tensor2vector;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_dwi2tensor -> dtiproc_tensor2fa;
121117-19:31:01,476 workflow DEBUG:
	 connection: dtiproc_tensor2fa -> dtiproc_MRmultiply_merge;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_tensor2fa -> dtiproc_outputnode;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_MRconvert -> dtiproc_threshold_b0;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_threshold_b0 -> dtiproc_median3D;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_median3D -> dtiproc_erode_mask_firstpass;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_erode_mask_firstpass -> dtiproc_erode_mask_secondpass;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_erode_mask_secondpass -> dtiproc_MRmultiply_merge;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_bet -> dtiproc_gen_WM_mask;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_gen_WM_mask -> dtiproc_csdeconv;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_gen_WM_mask -> dtiproc_threshold_wmmask;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_threshold_wmmask -> dtiproc_CSDstreamtrack;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_MRmultiply_merge -> dtiproc_MRmultiply;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_MRmultiply -> dtiproc_threshold_FA;
121117-19:31:01,477 workflow DEBUG:
	 connection: dtiproc_threshold_FA -> dtiproc_estimateresponse;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_estimateresponse -> dtiproc_csdeconv;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_csdeconv -> dtiproc_CSDstreamtrack;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_csdeconv -> dtiproc_outputnode;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_CSDstreamtrack -> dtiproc_outputnode;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_CSDstreamtrack -> dtiproc_tracks2prob;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_CSDstreamtrack -> dtiproc_tck2trk;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_tracks2prob -> dtiproc_outputnode;
121117-19:31:01,478 workflow DEBUG:
	 connection: dtiproc_tck2trk -> dtiproc_outputnode;
121117-19:31:01,710 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpAPWSpQ.dot to png format
WARNING: Empty - nipype.workflows.fmri
WARNING: Empty - nipype.workflows.fmri.fsl
121117-19:31:01,756 workflow DEBUG:
	 adding multipath trait: in_files
121117-19:31:01,758 workflow DEBUG:
	 adding multipath trait: in_files
121117-19:31:01,761 workflow DEBUG:
	 adding multipath trait: cope_file
121117-19:31:01,762 workflow DEBUG:
	 adding multipath trait: var_cope_file
121117-19:31:01,770 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.copemerge): No edge data
121117-19:31:01,770 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.copemerge): new edge data: {'connect': [('copes', 'in_files')]}
121117-19:31:01,770 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.varcopemerge): No edge data
121117-19:31:01,770 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.varcopemerge): new edge data: {'connect': [('varcopes', 'in_files')]}
121117-19:31:01,770 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.gendofvolume): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.inputspec, fixedfx.gendofvolume): new edge data: {'connect': [('dof_files', 'dof_files')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.copemerge, fixedfx.gendofvolume): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.copemerge, fixedfx.gendofvolume): new edge data: {'connect': [('merged_file', 'cope_files')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.copemerge, fixedfx.flameo): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.copemerge, fixedfx.flameo): new edge data: {'connect': [('merged_file', 'cope_file')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.varcopemerge, fixedfx.flameo): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.varcopemerge, fixedfx.flameo): new edge data: {'connect': [('merged_file', 'var_cope_file')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.l2model, fixedfx.flameo): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.l2model, fixedfx.flameo): new edge data: {'connect': [('design_mat', 'design_file'), ('design_con', 't_con_file'), ('design_grp', 'cov_split_file')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.gendofvolume, fixedfx.flameo): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.gendofvolume, fixedfx.flameo): new edge data: {'connect': [('dof_volume', 'dof_var_cope_file')]}
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.flameo, fixedfx.outputspec): No edge data
121117-19:31:01,771 workflow DEBUG:
	 (fixedfx.flameo, fixedfx.outputspec): new edge data: {'connect': [('res4d', 'res4d'), ('copes', 'copes'), ('var_copes', 'varcopes'), ('zstats', 'zstats'), ('tstats', 'tstats')]}
121117-19:31:01,775 workflow DEBUG:
	 adding multipath trait: ev_files
121117-19:31:01,775 workflow DEBUG:
	 adding multipath trait: fsf_file
121117-19:31:01,777 workflow DEBUG:
	 adding multipath trait: design_file
121117-19:31:01,778 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:01,780 workflow DEBUG:
	 adding multipath trait: corrections
121117-19:31:01,780 workflow DEBUG:
	 adding multipath trait: dof_file
121117-19:31:01,780 workflow DEBUG:
	 adding multipath trait: param_estimates
121117-19:31:01,780 workflow DEBUG:
	 adding multipath trait: sigmasquareds
121117-19:31:01,781 workflow DEBUG:
	 adding multipath trait: tcon_file
121117-19:31:01,782 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.inputspec, modelfit.level1design): No edge data
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.inputspec, modelfit.level1design): new edge data: {'connect': [('interscan_interval', 'interscan_interval'), ('session_info', 'session_info'), ('contrasts', 'contrasts'), ('bases', 'bases'), ('model_serial_correlations', 'model_serial_correlations')]}
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.inputspec, modelfit.modelestimate): No edge data
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.inputspec, modelfit.modelestimate): new edge data: {'connect': [('film_threshold', 'threshold'), ('functional_data', 'in_file')]}
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.level1design, modelfit.modelgen): No edge data
121117-19:31:01,791 workflow DEBUG:
	 (modelfit.level1design, modelfit.modelgen): new edge data: {'connect': [('fsf_files', 'fsf_file'), ('ev_files', 'ev_files')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelgen, modelfit.modelestimate): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelgen, modelfit.modelestimate): new edge data: {'connect': [('design_file', 'design_file')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelgen, modelfit.conestimate): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelgen, modelfit.conestimate): new edge data: {'connect': [('con_file', 'tcon_file')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelestimate, modelfit.conestimate): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelestimate, modelfit.conestimate): new edge data: {'connect': [('param_estimates', 'param_estimates'), ('sigmasquareds', 'sigmasquareds'), ('corrections', 'corrections'), ('dof_file', 'dof_file')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.conestimate, modelfit.ztop): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.conestimate, modelfit.ztop): new edge data: {'connect': [(('zstats', "S'pop_lambda = lambda x: x[0]\\n'\n.", ()), 'in_file')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.ztop, modelfit.outputspec): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.ztop, modelfit.outputspec): new edge data: {'connect': [('out_file', 'pfiles')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelestimate, modelfit.outputspec): No edge data
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.modelestimate, modelfit.outputspec): new edge data: {'connect': [('param_estimates', 'parameter_estimates'), ('dof_file', 'dof_file')]}
121117-19:31:01,792 workflow DEBUG:
	 (modelfit.conestimate, modelfit.outputspec): No edge data
121117-19:31:01,793 workflow DEBUG:
	 (modelfit.conestimate, modelfit.outputspec): new edge data: {'connect': [('copes', 'copes'), ('varcopes', 'varcopes')]}
121117-19:31:01,795 workflow DEBUG:
	 adding multipath trait: stat_image
121117-19:31:01,796 workflow DEBUG:
	 setting mapnode(overlaystats) input: show_negative_stats -> True
121117-19:31:01,796 workflow DEBUG:
	 setting mapnode(overlaystats) input: auto_thresh_bg -> True
121117-19:31:01,798 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:01,799 workflow DEBUG:
	 setting mapnode(slicestats) input: all_axial -> True
121117-19:31:01,799 workflow DEBUG:
	 setting mapnode(slicestats) input: image_width -> 512
121117-19:31:01,799 workflow DEBUG:
	 (overlay.overlaystats, overlay.slicestats): No edge data
121117-19:31:01,799 workflow DEBUG:
	 (overlay.overlaystats, overlay.slicestats): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_inputspec -> fixedfx_copemerge;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_inputspec -> fixedfx_varcopemerge;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_inputspec -> fixedfx_gendofvolume;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_copemerge -> fixedfx_gendofvolume;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_copemerge -> fixedfx_flameo;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_varcopemerge -> fixedfx_flameo;
121117-19:31:01,815 workflow DEBUG:
	 connection: fixedfx_gendofvolume -> fixedfx_flameo;
121117-19:31:01,816 workflow DEBUG:
	 connection: fixedfx_l2model -> fixedfx_flameo;
121117-19:31:01,816 workflow DEBUG:
	 connection: fixedfx_flameo -> fixedfx_outputspec;
121117-19:31:01,869 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmppl5srN.dot to png format
121117-19:31:01,885 workflow DEBUG:
	 connection: modelfit_inputspec -> modelfit_modelestimate;
121117-19:31:01,885 workflow DEBUG:
	 connection: modelfit_inputspec -> modelfit_level1design;
121117-19:31:01,885 workflow DEBUG:
	 connection: modelfit_level1design -> modelfit_modelgen;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_modelgen -> modelfit_modelestimate;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_modelgen -> modelfit_conestimate;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_modelestimate -> modelfit_conestimate;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_modelestimate -> modelfit_outputspec;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_conestimate -> modelfit_ztop;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_conestimate -> modelfit_outputspec;
121117-19:31:01,886 workflow DEBUG:
	 connection: modelfit_ztop -> modelfit_outputspec;
121117-19:31:01,941 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpjp3Uit.dot to png format
121117-19:31:01,953 workflow DEBUG:
	 connection: overlay_overlaystats -> overlay_slicestats;
121117-19:31:01,985 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpWRlQvh.dot to png format
121117-19:31:01,993 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:01,994 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.img2float): No edge data
121117-19:31:01,994 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.img2float): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:01,996 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): No edge data
121117-19:31:01,996 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:01,997 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): Edge data exists: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:01,997 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file'), (('out_file', 'S"def pickvol(filenames, fileidx, which):\\n    from nibabel import load\\n    import numpy as np\\n    if which.lower() == \'first\':\\n        idx = 0\\n    elif which.lower() == \'middle\':\\n        idx = int(np.ceil(load(filenames[fileidx]).get_shape()[3]/2))\\n    else:\\n        raise Exception(\'unknown value for volume selection : %s\'%which)\\n    return idx\\n"\n.', (0, 'middle')), 't_min')]}
121117-19:31:01,997 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.outputspec): No edge data
121117-19:31:01,997 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.outputspec): new edge data: {'connect': [('roi_file', 'reference')]}
121117-19:31:01,999 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.realign): No edge data
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.realign): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.realign): No edge data
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.realign): new edge data: {'connect': [('roi_file', 'ref_file')]}
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): No edge data
121117-19:31:02,1 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,2 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): Edge data exists: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,2 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters'), ('out_file', 'realigned_files')]}
121117-19:31:02,3 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,4 workflow DEBUG:
	 (featpreproc.realign, featpreproc.plot_motion): No edge data
121117-19:31:02,4 workflow DEBUG:
	 (featpreproc.realign, featpreproc.plot_motion): new edge data: {'connect': [('par_file', 'in_file')]}
121117-19:31:02,5 workflow DEBUG:
	 (featpreproc.plot_motion, featpreproc.outputspec): No edge data
121117-19:31:02,5 workflow DEBUG:
	 (featpreproc.plot_motion, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'motion_plots')]}
121117-19:31:02,7 workflow DEBUG:
	 (featpreproc.realign, featpreproc.meanfunc): No edge data
121117-19:31:02,7 workflow DEBUG:
	 (featpreproc.realign, featpreproc.meanfunc): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:02,8 workflow DEBUG:
	 (featpreproc.meanfunc, featpreproc.meanfuncmask): No edge data
121117-19:31:02,8 workflow DEBUG:
	 (featpreproc.meanfunc, featpreproc.meanfuncmask): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,9 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,10 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc): No edge data
121117-19:31:02,10 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,11 workflow DEBUG:
	 (featpreproc.meanfuncmask, featpreproc.maskfunc): No edge data
121117-19:31:02,11 workflow DEBUG:
	 (featpreproc.meanfuncmask, featpreproc.maskfunc): new edge data: {'connect': [('mask_file', 'in_file2')]}
121117-19:31:02,12 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,13 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.getthreshold): No edge data
121117-19:31:02,13 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.getthreshold): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,14 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,14 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:31:02,15 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.threshold): No edge data
121117-19:31:02,15 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.threshold): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,15 workflow DEBUG:
	 (featpreproc.getthreshold, featpreproc.threshold): No edge data
121117-19:31:02,16 workflow DEBUG:
	 (featpreproc.getthreshold, featpreproc.threshold): new edge data: {'connect': [(('out_stat', 'S"def getthreshop(thresh):\\n    return [\'-thr %.10f -Tmin -bin\'%(0.1*val[1]) for val in thresh]\\n"\n.', ()), 'op_string')]}
121117-19:31:02,17 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,17 workflow DEBUG:
	 adding multipath trait: mask_file
121117-19:31:02,18 workflow DEBUG:
	 (featpreproc.realign, featpreproc.medianval): No edge data
121117-19:31:02,18 workflow DEBUG:
	 (featpreproc.realign, featpreproc.medianval): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,18 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.medianval): No edge data
121117-19:31:02,18 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.medianval): new edge data: {'connect': [('out_file', 'mask_file')]}
121117-19:31:02,21 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,22 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.dilatemask): No edge data
121117-19:31:02,22 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.dilatemask): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,22 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.outputspec): No edge data
121117-19:31:02,22 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'mask')]}
121117-19:31:02,24 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,24 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,25 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc2): No edge data
121117-19:31:02,25 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,25 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc2): No edge data
121117-19:31:02,25 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc2): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:31:02,28 workflow DEBUG:
	 adding multipath trait: brightness_threshold
121117-19:31:02,28 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,29 workflow DEBUG:
	 adding multipath trait: usans
121117-19:31:02,30 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,30 workflow DEBUG:
	 adding multipath trait: mask_file
121117-19:31:02,31 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): No edge data
121117-19:31:02,31 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,31 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,31 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'mask_file')]}
121117-19:31:02,32 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,33 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,34 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): No edge data
121117-19:31:02,34 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,34 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,34 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'in_file2')]}
121117-19:31:02,35 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,36 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): No edge data
121117-19:31:02,36 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,37 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): No edge data
121117-19:31:02,37 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): new edge data: {'connect': [('out_file', 'in1')]}
121117-19:31:02,38 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): No edge data
121117-19:31:02,38 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): new edge data: {'connect': [('out_stat', 'in2')]}
121117-19:31:02,38 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): No edge data
121117-19:31:02,38 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,38 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): Edge data exists: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,39 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm'), ('in_files', 'in_file')]}
121117-19:31:02,39 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): No edge data
121117-19:31:02,39 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): new edge data: {'connect': [(('out_stat', "S'def getbtthresh(medianvals):\\n    return [0.75*val for val in medianvals]\\n'\n.", ()), 'brightness_threshold')]}
121117-19:31:02,40 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): No edge data
121117-19:31:02,40 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): new edge data: {'connect': [(('out', "S'def getusans(x):\\n    return [[tuple([val[0],0.75*val[1]])] for val in x]\\n'\n.", ()), 'usans')]}
121117-19:31:02,41 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): No edge data
121117-19:31:02,41 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): new edge data: {'connect': [('smoothed_file', 'smoothed_files')]}
121117-19:31:02,45 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.susan_smooth): No edge data
121117-19:31:02,45 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.susan_smooth): new edge data: {'connect': [('fwhm', 'inputnode.fwhm')]}
121117-19:31:02,49 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.susan_smooth): No edge data
121117-19:31:02,49 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.susan_smooth): new edge data: {'connect': [('out_file', 'inputnode.in_files')]}
121117-19:31:02,53 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.susan_smooth): No edge data
121117-19:31:02,53 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.susan_smooth): new edge data: {'connect': [('out_file', 'inputnode.mask_file')]}
121117-19:31:02,55 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,55 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,59 workflow DEBUG:
	 (featpreproc.susan_smooth, featpreproc.maskfunc3): No edge data
121117-19:31:02,59 workflow DEBUG:
	 (featpreproc.susan_smooth, featpreproc.maskfunc3): new edge data: {'connect': [('outputnode.smoothed_files', 'in_file')]}
121117-19:31:02,59 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc3): No edge data
121117-19:31:02,59 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc3): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:31:02,60 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.concat): No edge data
121117-19:31:02,61 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in1')]}
121117-19:31:02,61 workflow DEBUG:
	 (featpreproc.maskfunc3, featpreproc.concat): No edge data
121117-19:31:02,61 workflow DEBUG:
	 (featpreproc.maskfunc3, featpreproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in2')]}
121117-19:31:02,62 workflow DEBUG:
	 (featpreproc.concat, featpreproc.select): No edge data
121117-19:31:02,62 workflow DEBUG:
	 (featpreproc.concat, featpreproc.select): new edge data: {'connect': [('out', 'inlist')]}
121117-19:31:02,63 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.select): No edge data
121117-19:31:02,63 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.select): new edge data: {'connect': [(('fwhm', "S'def chooseindex(fwhm):\\n    if fwhm<1:\\n        return [0]\\n    else:\\n        return [1]\\n'\n.", ()), 'index')]}
121117-19:31:02,63 workflow DEBUG:
	 (featpreproc.select, featpreproc.outputspec): No edge data
121117-19:31:02,63 workflow DEBUG:
	 (featpreproc.select, featpreproc.outputspec): new edge data: {'connect': [('out', 'smoothed_files')]}
121117-19:31:02,64 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,65 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:31:02,65 workflow DEBUG:
	 (featpreproc.select, featpreproc.meanscale): No edge data
121117-19:31:02,65 workflow DEBUG:
	 (featpreproc.select, featpreproc.meanscale): new edge data: {'connect': [('out', 'in_file')]}
121117-19:31:02,66 workflow DEBUG:
	 (featpreproc.medianval, featpreproc.meanscale): No edge data
121117-19:31:02,66 workflow DEBUG:
	 (featpreproc.medianval, featpreproc.meanscale): new edge data: {'connect': [(('out_stat', 'S"def getmeanscale(medianvals):\\n    return [\'-mul %.10f\'%(10000./val) for val in medianvals]\\n"\n.', ()), 'op_string')]}
121117-19:31:02,67 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,68 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.highpass): No edge data
121117-19:31:02,68 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.highpass): new edge data: {'connect': [(('highpass', 'S"highpass_operand = lambda x:\'-bptf %.10f -1\'%x\\n"\np1\n.', ()), 'op_string')]}
121117-19:31:02,69 workflow DEBUG:
	 (featpreproc.meanscale, featpreproc.highpass): No edge data
121117-19:31:02,69 workflow DEBUG:
	 (featpreproc.meanscale, featpreproc.highpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,69 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.outputspec): No edge data
121117-19:31:02,69 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'highpassed_files')]}
121117-19:31:02,70 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.meanfunc3): No edge data
121117-19:31:02,70 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.meanfunc3): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:02,71 workflow DEBUG:
	 (featpreproc.meanfunc3, featpreproc.outputspec): No edge data
121117-19:31:02,71 workflow DEBUG:
	 (featpreproc.meanfunc3, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'mean')]}
121117-19:31:02,75 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,76 workflow DEBUG:
	 (preproc.inputspec, preproc.img2float): No edge data
121117-19:31:02,76 workflow DEBUG:
	 (preproc.inputspec, preproc.img2float): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:02,77 workflow DEBUG:
	 (preproc.img2float, preproc.extractref): No edge data
121117-19:31:02,78 workflow DEBUG:
	 (preproc.img2float, preproc.extractref): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:02,79 workflow DEBUG:
	 (preproc.img2float, preproc.extractref): Edge data exists: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file')]}
121117-19:31:02,79 workflow DEBUG:
	 (preproc.img2float, preproc.extractref): new edge data: {'connect': [(('out_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file'), (('out_file', 'S"def pickvol(filenames, fileidx, which):\\n    from nibabel import load\\n    import numpy as np\\n    if which.lower() == \'first\':\\n        idx = 0\\n    elif which.lower() == \'middle\':\\n        idx = int(np.ceil(load(filenames[fileidx]).get_shape()[3]/2))\\n    else:\\n        raise Exception(\'unknown value for volume selection : %s\'%which)\\n    return idx\\n"\n.', (0, 'middle')), 't_min')]}
121117-19:31:02,79 workflow DEBUG:
	 (preproc.extractref, preproc.outputspec): No edge data
121117-19:31:02,79 workflow DEBUG:
	 (preproc.extractref, preproc.outputspec): new edge data: {'connect': [('roi_file', 'reference')]}
121117-19:31:02,80 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,82 workflow DEBUG:
	 (preproc.img2float, preproc.realign): No edge data
121117-19:31:02,82 workflow DEBUG:
	 (preproc.img2float, preproc.realign): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,82 workflow DEBUG:
	 (preproc.extractref, preproc.realign): No edge data
121117-19:31:02,82 workflow DEBUG:
	 (preproc.extractref, preproc.realign): new edge data: {'connect': [('roi_file', 'ref_file')]}
121117-19:31:02,83 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): No edge data
121117-19:31:02,83 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,83 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): Edge data exists: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,83 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters'), ('out_file', 'realigned_files')]}
121117-19:31:02,84 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,85 workflow DEBUG:
	 (preproc.realign, preproc.plot_motion): No edge data
121117-19:31:02,86 workflow DEBUG:
	 (preproc.realign, preproc.plot_motion): new edge data: {'connect': [('par_file', 'in_file')]}
121117-19:31:02,86 workflow DEBUG:
	 (preproc.plot_motion, preproc.outputspec): No edge data
121117-19:31:02,86 workflow DEBUG:
	 (preproc.plot_motion, preproc.outputspec): new edge data: {'connect': [('out_file', 'motion_plots')]}
121117-19:31:02,91 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:02,93 workflow DEBUG:
	 adding multipath trait: reg_file
121117-19:31:02,94 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:02,97 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): No edge data
121117-19:31:02,97 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): new edge data: {'connect': [('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir')]}
121117-19:31:02,97 workflow DEBUG:
	 (getmask.inputspec, getmask.register): No edge data
121117-19:31:02,98 workflow DEBUG:
	 (getmask.inputspec, getmask.register): new edge data: {'connect': [('source_file', 'source_file'), ('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir'), ('contrast_type', 'contrast_type')]}
121117-19:31:02,98 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): No edge data
121117-19:31:02,98 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('source_file', 'source_file')]}
121117-19:31:02,98 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): No edge data
121117-19:31:02,98 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): new edge data: {'connect': [(('aparc_aseg', 'S\'def get_aparc_aseg(files):\\n    """Return the aparc+aseg.mgz file"""\\n    for name in files:\\n        if \\\'aparc+aseg\\\' in name:\\n            return name\\n    raise ValueError(\\\'aparc+aseg.mgz not found\\\')\\n\'\n.', ()), 'in_file')]}
121117-19:31:02,98 workflow DEBUG:
	 (getmask.register, getmask.transform): No edge data
121117-19:31:02,98 workflow DEBUG:
	 (getmask.register, getmask.transform): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:02,98 workflow DEBUG:
	 (getmask.threshold, getmask.transform): No edge data
121117-19:31:02,98 workflow DEBUG:
	 (getmask.threshold, getmask.transform): new edge data: {'connect': [('binary_file', 'target_file')]}
121117-19:31:02,100 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,101 workflow DEBUG:
	 setting mapnode(threshold2) input: dilate -> 1
121117-19:31:02,102 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): No edge data
121117-19:31:02,102 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): new edge data: {'connect': [('transformed_file', 'in_file')]}
121117-19:31:02,103 workflow DEBUG:
	 (getmask.register, getmask.outputspec): No edge data
121117-19:31:02,103 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:02,104 workflow DEBUG:
	 (getmask.register, getmask.outputspec): Edge data exists: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:02,104 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file'), ('min_cost_file', 'reg_cost')]}
121117-19:31:02,104 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): No edge data
121117-19:31:02,104 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): new edge data: {'connect': [('binary_file', 'mask_file')]}
121117-19:31:02,121 workflow DEBUG:
	 (preproc.inputspec, preproc.getmask): No edge data
121117-19:31:02,121 workflow DEBUG:
	 (preproc.inputspec, preproc.getmask): new edge data: {'connect': [('subject_id', 'inputspec.subject_id'), ('subjects_dir', 'inputspec.subjects_dir')]}
121117-19:31:02,129 workflow DEBUG:
	 setting nodelevel(getmask.inputspec) input contrast_type = t2
121117-19:31:02,137 workflow DEBUG:
	 (preproc.extractref, preproc.getmask): No edge data
121117-19:31:02,138 workflow DEBUG:
	 (preproc.extractref, preproc.getmask): new edge data: {'connect': [('roi_file', 'inputspec.source_file')]}
121117-19:31:02,139 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,140 workflow DEBUG:
	 (preproc.realign, preproc.maskfunc): No edge data
121117-19:31:02,140 workflow DEBUG:
	 (preproc.realign, preproc.maskfunc): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,147 workflow DEBUG:
	 (preproc.getmask, preproc.maskfunc): No edge data
121117-19:31:02,148 workflow DEBUG:
	 (preproc.getmask, preproc.maskfunc): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file2')]}
121117-19:31:02,150 workflow DEBUG:
	 adding multipath trait: brightness_threshold
121117-19:31:02,150 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,151 workflow DEBUG:
	 adding multipath trait: usans
121117-19:31:02,152 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,153 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): No edge data
121117-19:31:02,153 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,153 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,153 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'mask_file')]}
121117-19:31:02,155 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,155 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): No edge data
121117-19:31:02,155 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,156 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,156 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'in_file2')]}
121117-19:31:02,158 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,158 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): No edge data
121117-19:31:02,159 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): No edge data
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): new edge data: {'connect': [('out_file', 'in1')]}
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): No edge data
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): new edge data: {'connect': [('out_stat', 'in2')]}
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): No edge data
121117-19:31:02,160 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,161 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): Edge data exists: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,161 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm'), ('in_files', 'in_file')]}
121117-19:31:02,161 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): No edge data
121117-19:31:02,161 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): new edge data: {'connect': [(('out_stat', "S'def getbtthresh(medianvals):\\n    return [0.75*val for val in medianvals]\\n'\n.", ()), 'brightness_threshold')]}
121117-19:31:02,162 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): No edge data
121117-19:31:02,162 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): new edge data: {'connect': [(('out', "S'def getusans(x):\\n    return [[tuple([val[0],0.75*val[1]])] for val in x]\\n'\n.", ()), 'usans')]}
121117-19:31:02,163 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): No edge data
121117-19:31:02,163 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): new edge data: {'connect': [('smoothed_file', 'smoothed_files')]}
121117-19:31:02,167 workflow DEBUG:
	 (preproc.inputspec, preproc.susan_smooth): No edge data
121117-19:31:02,167 workflow DEBUG:
	 (preproc.inputspec, preproc.susan_smooth): new edge data: {'connect': [('fwhm', 'inputnode.fwhm')]}
121117-19:31:02,171 workflow DEBUG:
	 (preproc.maskfunc, preproc.susan_smooth): No edge data
121117-19:31:02,172 workflow DEBUG:
	 (preproc.maskfunc, preproc.susan_smooth): new edge data: {'connect': [('out_file', 'inputnode.in_files')]}
121117-19:31:02,183 workflow DEBUG:
	 (preproc.getmask, preproc.susan_smooth): No edge data
121117-19:31:02,183 workflow DEBUG:
	 (preproc.getmask, preproc.susan_smooth): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'inputnode.mask_file')]}
121117-19:31:02,184 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,188 workflow DEBUG:
	 (preproc.susan_smooth, preproc.maskfunc3): No edge data
121117-19:31:02,188 workflow DEBUG:
	 (preproc.susan_smooth, preproc.maskfunc3): new edge data: {'connect': [('outputnode.smoothed_files', 'in_file')]}
121117-19:31:02,196 workflow DEBUG:
	 (preproc.getmask, preproc.maskfunc3): No edge data
121117-19:31:02,196 workflow DEBUG:
	 (preproc.getmask, preproc.maskfunc3): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'in_file2')]}
121117-19:31:02,197 workflow DEBUG:
	 (preproc.maskfunc, preproc.concat): No edge data
121117-19:31:02,197 workflow DEBUG:
	 (preproc.maskfunc, preproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in1')]}
121117-19:31:02,197 workflow DEBUG:
	 (preproc.maskfunc3, preproc.concat): No edge data
121117-19:31:02,197 workflow DEBUG:
	 (preproc.maskfunc3, preproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in2')]}
121117-19:31:02,198 workflow DEBUG:
	 (preproc.concat, preproc.select): No edge data
121117-19:31:02,198 workflow DEBUG:
	 (preproc.concat, preproc.select): new edge data: {'connect': [('out', 'inlist')]}
121117-19:31:02,199 workflow DEBUG:
	 (preproc.inputspec, preproc.select): No edge data
121117-19:31:02,199 workflow DEBUG:
	 (preproc.inputspec, preproc.select): new edge data: {'connect': [(('fwhm', "S'def chooseindex(fwhm):\\n    if fwhm<1:\\n        return [0]\\n    else:\\n        return [1]\\n'\n.", ()), 'index')]}
121117-19:31:02,200 workflow DEBUG:
	 (preproc.select, preproc.outputspec): No edge data
121117-19:31:02,200 workflow DEBUG:
	 (preproc.select, preproc.outputspec): new edge data: {'connect': [('out', 'smoothed_files')]}
121117-19:31:02,201 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,201 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:31:02,202 workflow DEBUG:
	 (preproc.select, preproc.meanscale): No edge data
121117-19:31:02,202 workflow DEBUG:
	 (preproc.select, preproc.meanscale): new edge data: {'connect': [('out', 'in_file')]}
121117-19:31:02,203 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,204 workflow DEBUG:
	 (preproc.realign, preproc.medianval): No edge data
121117-19:31:02,204 workflow DEBUG:
	 (preproc.realign, preproc.medianval): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,211 workflow DEBUG:
	 (preproc.getmask, preproc.medianval): No edge data
121117-19:31:02,212 workflow DEBUG:
	 (preproc.getmask, preproc.medianval): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file')]}
121117-19:31:02,212 workflow DEBUG:
	 (preproc.medianval, preproc.meanscale): No edge data
121117-19:31:02,212 workflow DEBUG:
	 (preproc.medianval, preproc.meanscale): new edge data: {'connect': [(('out_stat', 'S"def getmeanscale(medianvals):\\n    return [\'-mul %.10f\'%(10000./val) for val in medianvals]\\n"\n.', ()), 'op_string')]}
121117-19:31:02,213 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,214 workflow DEBUG:
	 (preproc.inputspec, preproc.highpass): No edge data
121117-19:31:02,214 workflow DEBUG:
	 (preproc.inputspec, preproc.highpass): new edge data: {'connect': [(('highpass', 'S"highpass_operand = lambda x:\'-bptf %.10f -1\'%x\\n"\np1\n.', ()), 'op_string')]}
121117-19:31:02,215 workflow DEBUG:
	 (preproc.meanscale, preproc.highpass): No edge data
121117-19:31:02,215 workflow DEBUG:
	 (preproc.meanscale, preproc.highpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,215 workflow DEBUG:
	 (preproc.highpass, preproc.outputspec): No edge data
121117-19:31:02,215 workflow DEBUG:
	 (preproc.highpass, preproc.outputspec): new edge data: {'connect': [('out_file', 'highpassed_files')]}
121117-19:31:02,223 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): No edge data
121117-19:31:02,223 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file')]}
121117-19:31:02,230 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): Edge data exists: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file')]}
121117-19:31:02,230 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file'), ('outputspec.reg_file', 'reg_file')]}
121117-19:31:02,237 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): Edge data exists: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file'), ('outputspec.reg_file', 'reg_file')]}
121117-19:31:02,238 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [(('outputspec.mask_file', "S'def pickfirst(files):\\n    if isinstance(files, list):\\n        return files[0]\\n    else:\\n        return files\\n'\n.", ()), 'mask_file'), ('outputspec.reg_file', 'reg_file'), ('outputspec.reg_cost', 'reg_cost')]}
121117-19:31:02,241 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,242 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.img2float): No edge data
121117-19:31:02,242 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.img2float): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:02,243 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,244 workflow DEBUG:
	 adding multipath trait: t_min
121117-19:31:02,245 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): No edge data
121117-19:31:02,245 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,245 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): Edge data exists: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,246 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.extractref): new edge data: {'connect': [('out_file', 'in_file'), (('out_file', "S'def pickmiddle(files):\\n    from nibabel import load\\n    import numpy as np\\n    middlevol = []\\n    for f in files:\\n        middlevol.append(int(np.ceil(load(f).get_shape()[3]/2)))\\n    return middlevol\\n'\n.", ()), 't_min')]}
121117-19:31:02,246 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.outputspec): No edge data
121117-19:31:02,246 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.outputspec): new edge data: {'connect': [('roi_file', 'reference')]}
121117-19:31:02,247 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,248 workflow DEBUG:
	 adding multipath trait: ref_file
121117-19:31:02,249 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.realign): No edge data
121117-19:31:02,249 workflow DEBUG:
	 (featpreproc.img2float, featpreproc.realign): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,249 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.realign): No edge data
121117-19:31:02,249 workflow DEBUG:
	 (featpreproc.extractref, featpreproc.realign): new edge data: {'connect': [('roi_file', 'ref_file')]}
121117-19:31:02,250 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): No edge data
121117-19:31:02,250 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,250 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): Edge data exists: {'connect': [('par_file', 'motion_parameters')]}
121117-19:31:02,250 workflow DEBUG:
	 (featpreproc.realign, featpreproc.outputspec): new edge data: {'connect': [('par_file', 'motion_parameters'), ('out_file', 'realigned_files')]}
121117-19:31:02,252 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,252 workflow DEBUG:
	 (featpreproc.realign, featpreproc.plot_motion): No edge data
121117-19:31:02,253 workflow DEBUG:
	 (featpreproc.realign, featpreproc.plot_motion): new edge data: {'connect': [('par_file', 'in_file')]}
121117-19:31:02,253 workflow DEBUG:
	 (featpreproc.plot_motion, featpreproc.outputspec): No edge data
121117-19:31:02,253 workflow DEBUG:
	 (featpreproc.plot_motion, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'motion_plots')]}
121117-19:31:02,254 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,255 workflow DEBUG:
	 (featpreproc.realign, featpreproc.meanfunc): No edge data
121117-19:31:02,255 workflow DEBUG:
	 (featpreproc.realign, featpreproc.meanfunc): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,257 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,258 workflow DEBUG:
	 (featpreproc.meanfunc, featpreproc.meanfuncmask): No edge data
121117-19:31:02,258 workflow DEBUG:
	 (featpreproc.meanfunc, featpreproc.meanfuncmask): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,259 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,259 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,260 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc): No edge data
121117-19:31:02,260 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,261 workflow DEBUG:
	 (featpreproc.meanfuncmask, featpreproc.maskfunc): No edge data
121117-19:31:02,261 workflow DEBUG:
	 (featpreproc.meanfuncmask, featpreproc.maskfunc): new edge data: {'connect': [('mask_file', 'in_file2')]}
121117-19:31:02,262 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,263 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.getthreshold): No edge data
121117-19:31:02,263 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.getthreshold): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,266 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,266 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:31:02,266 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.threshold): No edge data
121117-19:31:02,267 workflow DEBUG:
	 (featpreproc.maskfunc, featpreproc.threshold): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,267 workflow DEBUG:
	 (featpreproc.getthreshold, featpreproc.threshold): No edge data
121117-19:31:02,267 workflow DEBUG:
	 (featpreproc.getthreshold, featpreproc.threshold): new edge data: {'connect': [(('out_stat', 'S"def getthreshop(thresh):\\n    return [\'-thr %.10f -Tmin -bin\'%(0.1*val[1]) for val in thresh]\\n"\n.', ()), 'op_string')]}
121117-19:31:02,268 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,269 workflow DEBUG:
	 adding multipath trait: mask_file
121117-19:31:02,269 workflow DEBUG:
	 (featpreproc.realign, featpreproc.medianval): No edge data
121117-19:31:02,269 workflow DEBUG:
	 (featpreproc.realign, featpreproc.medianval): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,270 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.medianval): No edge data
121117-19:31:02,270 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.medianval): new edge data: {'connect': [('out_file', 'mask_file')]}
121117-19:31:02,271 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,272 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.dilatemask): No edge data
121117-19:31:02,272 workflow DEBUG:
	 (featpreproc.threshold, featpreproc.dilatemask): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,272 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.outputspec): No edge data
121117-19:31:02,272 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'mask')]}
121117-19:31:02,273 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,273 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,274 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc2): No edge data
121117-19:31:02,274 workflow DEBUG:
	 (featpreproc.realign, featpreproc.maskfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,275 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc2): No edge data
121117-19:31:02,275 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc2): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:31:02,277 workflow DEBUG:
	 adding multipath trait: brightness_threshold
121117-19:31:02,278 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,278 workflow DEBUG:
	 adding multipath trait: usans
121117-19:31:02,279 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,280 workflow DEBUG:
	 adding multipath trait: mask_file
121117-19:31:02,280 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): No edge data
121117-19:31:02,280 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,281 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,281 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'mask_file')]}
121117-19:31:02,282 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,282 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,283 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): No edge data
121117-19:31:02,283 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,283 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,283 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'in_file2')]}
121117-19:31:02,285 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,285 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): No edge data
121117-19:31:02,285 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): No edge data
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): new edge data: {'connect': [('out_file', 'in1')]}
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): No edge data
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): new edge data: {'connect': [('out_stat', 'in2')]}
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): No edge data
121117-19:31:02,287 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,288 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): Edge data exists: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,288 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm'), ('in_files', 'in_file')]}
121117-19:31:02,288 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): No edge data
121117-19:31:02,288 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): new edge data: {'connect': [(('out_stat', "S'def getbtthresh(medianvals):\\n    return [0.75*val for val in medianvals]\\n'\n.", ()), 'brightness_threshold')]}
121117-19:31:02,289 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): No edge data
121117-19:31:02,289 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): new edge data: {'connect': [(('out', "S'def getusans(x):\\n    return [[tuple([val[0],0.75*val[1]])] for val in x]\\n'\n.", ()), 'usans')]}
121117-19:31:02,290 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): No edge data
121117-19:31:02,290 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): new edge data: {'connect': [('smoothed_file', 'smoothed_files')]}
121117-19:31:02,294 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.susan_smooth): No edge data
121117-19:31:02,295 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.susan_smooth): new edge data: {'connect': [('fwhm', 'inputnode.fwhm')]}
121117-19:31:02,299 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.susan_smooth): No edge data
121117-19:31:02,299 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.susan_smooth): new edge data: {'connect': [('out_file', 'inputnode.in_files')]}
121117-19:31:02,303 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.susan_smooth): No edge data
121117-19:31:02,303 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.susan_smooth): new edge data: {'connect': [('out_file', 'inputnode.mask_file')]}
121117-19:31:02,304 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,304 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,308 workflow DEBUG:
	 (featpreproc.susan_smooth, featpreproc.maskfunc3): No edge data
121117-19:31:02,308 workflow DEBUG:
	 (featpreproc.susan_smooth, featpreproc.maskfunc3): new edge data: {'connect': [('outputnode.smoothed_files', 'in_file')]}
121117-19:31:02,308 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc3): No edge data
121117-19:31:02,308 workflow DEBUG:
	 (featpreproc.dilatemask, featpreproc.maskfunc3): new edge data: {'connect': [('out_file', 'in_file2')]}
121117-19:31:02,309 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.concat): No edge data
121117-19:31:02,309 workflow DEBUG:
	 (featpreproc.maskfunc2, featpreproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in1')]}
121117-19:31:02,310 workflow DEBUG:
	 (featpreproc.maskfunc3, featpreproc.concat): No edge data
121117-19:31:02,310 workflow DEBUG:
	 (featpreproc.maskfunc3, featpreproc.concat): new edge data: {'connect': [(('out_file', "S'tolist = lambda x: [x]\\n'\np1\n.", ()), 'in2')]}
121117-19:31:02,311 workflow DEBUG:
	 (featpreproc.concat, featpreproc.select): No edge data
121117-19:31:02,311 workflow DEBUG:
	 (featpreproc.concat, featpreproc.select): new edge data: {'connect': [('out', 'inlist')]}
121117-19:31:02,312 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.select): No edge data
121117-19:31:02,312 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.select): new edge data: {'connect': [(('fwhm', "S'def chooseindex(fwhm):\\n    if fwhm<1:\\n        return [0]\\n    else:\\n        return [1]\\n'\n.", ()), 'index')]}
121117-19:31:02,312 workflow DEBUG:
	 (featpreproc.select, featpreproc.outputspec): No edge data
121117-19:31:02,312 workflow DEBUG:
	 (featpreproc.select, featpreproc.outputspec): new edge data: {'connect': [('out', 'smoothed_files')]}
121117-19:31:02,313 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,314 workflow DEBUG:
	 adding multipath trait: op_string
121117-19:31:02,314 workflow DEBUG:
	 (featpreproc.select, featpreproc.meanscale): No edge data
121117-19:31:02,314 workflow DEBUG:
	 (featpreproc.select, featpreproc.meanscale): new edge data: {'connect': [('out', 'in_file')]}
121117-19:31:02,315 workflow DEBUG:
	 (featpreproc.medianval, featpreproc.meanscale): No edge data
121117-19:31:02,315 workflow DEBUG:
	 (featpreproc.medianval, featpreproc.meanscale): new edge data: {'connect': [(('out_stat', 'S"def getmeanscale(medianvals):\\n    return [\'-mul %.10f\'%(10000./val) for val in medianvals]\\n"\n.', ()), 'op_string')]}
121117-19:31:02,316 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,317 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.highpass): No edge data
121117-19:31:02,317 workflow DEBUG:
	 (featpreproc.inputspec, featpreproc.highpass): new edge data: {'connect': [(('highpass', 'S"highpass_operand = lambda x:\'-bptf %.10f -1\'%x\\n"\np1\n.', ()), 'op_string')]}
121117-19:31:02,317 workflow DEBUG:
	 (featpreproc.meanscale, featpreproc.highpass): No edge data
121117-19:31:02,317 workflow DEBUG:
	 (featpreproc.meanscale, featpreproc.highpass): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,318 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.outputspec): No edge data
121117-19:31:02,318 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'highpassed_files')]}
121117-19:31:02,319 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,320 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.meanfunc3): No edge data
121117-19:31:02,320 workflow DEBUG:
	 (featpreproc.highpass, featpreproc.meanfunc3): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,320 workflow DEBUG:
	 (featpreproc.meanfunc3, featpreproc.outputspec): No edge data
121117-19:31:02,320 workflow DEBUG:
	 (featpreproc.meanfunc3, featpreproc.outputspec): new edge data: {'connect': [('out_file', 'mean')]}
121117-19:31:02,323 workflow DEBUG:
	 adding multipath trait: brightness_threshold
121117-19:31:02,323 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,323 workflow DEBUG:
	 adding multipath trait: usans
121117-19:31:02,325 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,325 workflow DEBUG:
	 adding multipath trait: mask_file
121117-19:31:02,326 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): No edge data
121117-19:31:02,326 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,326 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,326 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.median): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'mask_file')]}
121117-19:31:02,328 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,328 workflow DEBUG:
	 adding multipath trait: in_file2
121117-19:31:02,329 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): No edge data
121117-19:31:02,329 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,329 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): Edge data exists: {'connect': [('in_files', 'in_file')]}
121117-19:31:02,329 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.mask): new edge data: {'connect': [('in_files', 'in_file'), ('mask_file', 'in_file2')]}
121117-19:31:02,330 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:02,331 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): No edge data
121117-19:31:02,331 workflow DEBUG:
	 (susan_smooth.mask, susan_smooth.meanfunc2): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:02,332 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): No edge data
121117-19:31:02,332 workflow DEBUG:
	 (susan_smooth.meanfunc2, susan_smooth.merge): new edge data: {'connect': [('out_file', 'in1')]}
121117-19:31:02,332 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): No edge data
121117-19:31:02,333 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.merge): new edge data: {'connect': [('out_stat', 'in2')]}
121117-19:31:02,333 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): No edge data
121117-19:31:02,333 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,333 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): Edge data exists: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:02,333 workflow DEBUG:
	 (susan_smooth.inputnode, susan_smooth.smooth): new edge data: {'connect': [('fwhm', 'fwhm'), ('in_files', 'in_file')]}
121117-19:31:02,334 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): No edge data
121117-19:31:02,334 workflow DEBUG:
	 (susan_smooth.median, susan_smooth.smooth): new edge data: {'connect': [(('out_stat', "S'def getbtthresh(medianvals):\\n    return [0.75*val for val in medianvals]\\n'\n.", ()), 'brightness_threshold')]}
121117-19:31:02,335 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): No edge data
121117-19:31:02,335 workflow DEBUG:
	 (susan_smooth.merge, susan_smooth.smooth): new edge data: {'connect': [(('out', "S'def getusans(x):\\n    return [[tuple([val[0],0.75*val[1]])] for val in x]\\n'\n.", ()), 'usans')]}
121117-19:31:02,336 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): No edge data
121117-19:31:02,336 workflow DEBUG:
	 (susan_smooth.smooth, susan_smooth.outputnode): new edge data: {'connect': [('smoothed_file', 'smoothed_files')]}
121117-19:31:02,359 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_select;
121117-19:31:02,359 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_highpass;
121117-19:31:02,359 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_img2float;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_img2float -> featpreproc_extractref;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_img2float -> featpreproc_realign;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_extractref -> featpreproc_realign;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_extractref -> featpreproc_outputspec;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_plot_motion;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_medianval;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_maskfunc2;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_outputspec;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_meanfunc;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_maskfunc;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_meanfunc -> featpreproc_meanfuncmask;
121117-19:31:02,360 workflow DEBUG:
	 connection: featpreproc_meanfuncmask -> featpreproc_maskfunc;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_maskfunc -> featpreproc_getthreshold;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_maskfunc -> featpreproc_threshold;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_getthreshold -> featpreproc_threshold;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_threshold -> featpreproc_dilatemask;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_threshold -> featpreproc_medianval;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_maskfunc3;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_outputspec;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_maskfunc2;
121117-19:31:02,361 workflow DEBUG:
	 connection: featpreproc_maskfunc2 -> featpreproc_concat;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_smooth;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_median;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_mask;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_mask -> featpreproc_susan_smooth_meanfunc2;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_meanfunc2 -> featpreproc_susan_smooth_merge;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_median -> featpreproc_susan_smooth_merge;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_median -> featpreproc_susan_smooth_smooth;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_merge -> featpreproc_susan_smooth_smooth;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_susan_smooth_smooth -> featpreproc_susan_smooth_outputnode;
121117-19:31:02,362 workflow DEBUG:
	 connection: featpreproc_maskfunc3 -> featpreproc_concat;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_medianval -> featpreproc_meanscale;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_concat -> featpreproc_select;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_select -> featpreproc_outputspec;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_select -> featpreproc_meanscale;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_meanscale -> featpreproc_highpass;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_highpass -> featpreproc_meanfunc3;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_highpass -> featpreproc_outputspec;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_meanfunc3 -> featpreproc_outputspec;
121117-19:31:02,363 workflow DEBUG:
	 connection: featpreproc_plot_motion -> featpreproc_outputspec;
121117-19:31:02,363 workflow DEBUG:
	 cross connection: featpreproc_susan_smooth_outputnode -> featpreproc_maskfunc3;
121117-19:31:02,363 workflow DEBUG:
	 cross connection: featpreproc_maskfunc2 -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,364 workflow DEBUG:
	 cross connection: featpreproc_dilatemask -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,364 workflow DEBUG:
	 cross connection: featpreproc_inputspec -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,587 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmp5HsQEB.dot to png format
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_select;
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_img2float;
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_highpass;
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_img2float -> preproc_extractref;
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_img2float -> preproc_realign;
121117-19:31:02,608 workflow DEBUG:
	 connection: preproc_extractref -> preproc_outputspec;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_extractref -> preproc_realign;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_register;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_fssource;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_transform;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_register -> preproc_getmask_transform;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_register -> preproc_getmask_outputspec;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_fssource -> preproc_getmask_threshold;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_threshold -> preproc_getmask_transform;
121117-19:31:02,609 workflow DEBUG:
	 connection: preproc_getmask_transform -> preproc_getmask_threshold2;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_getmask_threshold2 -> preproc_getmask_outputspec;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_realign -> preproc_outputspec;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_realign -> preproc_medianval;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_realign -> preproc_maskfunc;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_realign -> preproc_plot_motion;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_medianval -> preproc_meanscale;
121117-19:31:02,610 workflow DEBUG:
	 connection: preproc_maskfunc -> preproc_concat;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_inputnode -> preproc_susan_smooth_smooth;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_inputnode -> preproc_susan_smooth_median;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_inputnode -> preproc_susan_smooth_mask;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_median -> preproc_susan_smooth_merge;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_median -> preproc_susan_smooth_smooth;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_mask -> preproc_susan_smooth_meanfunc2;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_meanfunc2 -> preproc_susan_smooth_merge;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_merge -> preproc_susan_smooth_smooth;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_susan_smooth_smooth -> preproc_susan_smooth_outputnode;
121117-19:31:02,611 workflow DEBUG:
	 connection: preproc_maskfunc3 -> preproc_concat;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_concat -> preproc_select;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_select -> preproc_outputspec;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_select -> preproc_meanscale;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_meanscale -> preproc_highpass;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_highpass -> preproc_outputspec;
121117-19:31:02,612 workflow DEBUG:
	 connection: preproc_plot_motion -> preproc_outputspec;
121117-19:31:02,612 workflow DEBUG:
	 cross connection: preproc_susan_smooth_outputnode -> preproc_maskfunc3;
121117-19:31:02,612 workflow DEBUG:
	 cross connection: preproc_maskfunc -> preproc_susan_smooth_inputnode;
121117-19:31:02,612 workflow DEBUG:
	 cross connection: preproc_inputspec -> preproc_susan_smooth_inputnode;
121117-19:31:02,612 workflow DEBUG:
	 cross connection: preproc_inputspec -> preproc_getmask_inputspec;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_inputspec -> preproc_getmask_inputspec;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_susan_smooth_inputnode;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_medianval;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_maskfunc;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_maskfunc3;
121117-19:31:02,613 workflow DEBUG:
	 cross connection: preproc_extractref -> preproc_getmask_inputspec;
121117-19:31:02,851 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpcYttSv.dot to png format
121117-19:31:02,874 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_select;
121117-19:31:02,874 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_highpass;
121117-19:31:02,874 workflow DEBUG:
	 connection: featpreproc_inputspec -> featpreproc_img2float;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_img2float -> featpreproc_extractref;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_img2float -> featpreproc_realign;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_extractref -> featpreproc_outputspec;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_extractref -> featpreproc_realign;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_plot_motion;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_meanfunc;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_maskfunc;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_medianval;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_maskfunc2;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_realign -> featpreproc_outputspec;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_plot_motion -> featpreproc_outputspec;
121117-19:31:02,875 workflow DEBUG:
	 connection: featpreproc_meanfunc -> featpreproc_meanfuncmask;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_meanfuncmask -> featpreproc_maskfunc;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_maskfunc -> featpreproc_getthreshold;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_maskfunc -> featpreproc_threshold;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_getthreshold -> featpreproc_threshold;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_threshold -> featpreproc_medianval;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_threshold -> featpreproc_dilatemask;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_medianval -> featpreproc_meanscale;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_outputspec;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_maskfunc3;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_dilatemask -> featpreproc_maskfunc2;
121117-19:31:02,876 workflow DEBUG:
	 connection: featpreproc_maskfunc2 -> featpreproc_concat;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_mask;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_median;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_inputnode -> featpreproc_susan_smooth_smooth;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_median -> featpreproc_susan_smooth_merge;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_median -> featpreproc_susan_smooth_smooth;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_mask -> featpreproc_susan_smooth_meanfunc2;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_meanfunc2 -> featpreproc_susan_smooth_merge;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_merge -> featpreproc_susan_smooth_smooth;
121117-19:31:02,877 workflow DEBUG:
	 connection: featpreproc_susan_smooth_smooth -> featpreproc_susan_smooth_outputnode;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_maskfunc3 -> featpreproc_concat;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_concat -> featpreproc_select;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_select -> featpreproc_outputspec;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_select -> featpreproc_meanscale;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_meanscale -> featpreproc_highpass;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_highpass -> featpreproc_outputspec;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_highpass -> featpreproc_meanfunc3;
121117-19:31:02,878 workflow DEBUG:
	 connection: featpreproc_meanfunc3 -> featpreproc_outputspec;
121117-19:31:02,878 workflow DEBUG:
	 cross connection: featpreproc_inputspec -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,878 workflow DEBUG:
	 cross connection: featpreproc_maskfunc2 -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,879 workflow DEBUG:
	 cross connection: featpreproc_dilatemask -> featpreproc_susan_smooth_inputnode;
121117-19:31:02,879 workflow DEBUG:
	 cross connection: featpreproc_susan_smooth_outputnode -> featpreproc_maskfunc3;
121117-19:31:03,102 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmp9V9CdD.dot to png format
121117-19:31:03,118 workflow DEBUG:
	 connection: susan_smooth_inputnode -> susan_smooth_median;
121117-19:31:03,118 workflow DEBUG:
	 connection: susan_smooth_inputnode -> susan_smooth_smooth;
121117-19:31:03,118 workflow DEBUG:
	 connection: susan_smooth_inputnode -> susan_smooth_mask;
121117-19:31:03,118 workflow DEBUG:
	 connection: susan_smooth_median -> susan_smooth_merge;
121117-19:31:03,119 workflow DEBUG:
	 connection: susan_smooth_median -> susan_smooth_smooth;
121117-19:31:03,119 workflow DEBUG:
	 connection: susan_smooth_mask -> susan_smooth_meanfunc2;
121117-19:31:03,119 workflow DEBUG:
	 connection: susan_smooth_meanfunc2 -> susan_smooth_merge;
121117-19:31:03,119 workflow DEBUG:
	 connection: susan_smooth_merge -> susan_smooth_smooth;
121117-19:31:03,119 workflow DEBUG:
	 connection: susan_smooth_smooth -> susan_smooth_outputnode;
121117-19:31:03,172 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpXuN6fG.dot to png format
WARNING: Empty - nipype.workflows.fmri.spm
WARNING: Empty - nipype.workflows.fmri.spm.estimate
121117-19:31:03,270 workflow DEBUG:
	 adding multipath trait: channel_files
121117-19:31:03,272 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.segment): No edge data
121117-19:31:03,272 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.segment): new edge data: {'connect': [('structural_files', 'channel_files')]}
121117-19:31:03,272 workflow CRITICAL:
	 MATLAB not found: DARTEL not setting tissue templates
121117-19:31:03,275 workflow DEBUG:
	 (dartel_template.segment, dartel_template.dartel): No edge data
121117-19:31:03,275 workflow DEBUG:
	 (dartel_template.segment, dartel_template.dartel): new edge data: {'connect': [(('dartel_input_images', "S'def get2classes(dartel_files):\\n    class1images = []\\n    class2images = []\\n    for session in dartel_files:\\n        class1images.extend(session[0])\\n        class2images.extend(session[1])\\n    return [class1images, class2images]\\n'\n.", ()), 'image_files')]}
121117-19:31:03,275 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.dartel): No edge data
121117-19:31:03,275 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.dartel): new edge data: {'connect': [('template_prefix', 'template_prefix')]}
121117-19:31:03,276 workflow DEBUG:
	 (dartel_template.dartel, dartel_template.outputspec): No edge data
121117-19:31:03,276 workflow DEBUG:
	 (dartel_template.dartel, dartel_template.outputspec): new edge data: {'connect': [('final_template_file', 'template_file'), ('dartel_flow_fields', 'flow_fields')]}
121117-19:31:03,280 workflow DEBUG:
	 (preproc.inputspec, preproc.realign): No edge data
121117-19:31:03,280 workflow DEBUG:
	 (preproc.inputspec, preproc.realign): new edge data: {'connect': [('functionals', 'in_files')]}
121117-19:31:03,286 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:03,287 workflow DEBUG:
	 adding multipath trait: reg_file
121117-19:31:03,288 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:03,291 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): new edge data: {'connect': [('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir')]}
121117-19:31:03,292 workflow DEBUG:
	 (getmask.inputspec, getmask.register): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.inputspec, getmask.register): new edge data: {'connect': [('source_file', 'source_file'), ('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir'), ('contrast_type', 'contrast_type')]}
121117-19:31:03,292 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('source_file', 'source_file')]}
121117-19:31:03,292 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): new edge data: {'connect': [(('aparc_aseg', 'S\'def get_aparc_aseg(files):\\n    """Return the aparc+aseg.mgz file"""\\n    for name in files:\\n        if \\\'aparc+aseg\\\' in name:\\n            return name\\n    raise ValueError(\\\'aparc+aseg.mgz not found\\\')\\n\'\n.', ()), 'in_file')]}
121117-19:31:03,292 workflow DEBUG:
	 (getmask.register, getmask.transform): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.register, getmask.transform): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:03,292 workflow DEBUG:
	 (getmask.threshold, getmask.transform): No edge data
121117-19:31:03,292 workflow DEBUG:
	 (getmask.threshold, getmask.transform): new edge data: {'connect': [('binary_file', 'target_file')]}
121117-19:31:03,294 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:03,295 workflow DEBUG:
	 setting mapnode(threshold2) input: dilate -> 1
121117-19:31:03,296 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): No edge data
121117-19:31:03,296 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): new edge data: {'connect': [('transformed_file', 'in_file')]}
121117-19:31:03,297 workflow DEBUG:
	 (getmask.register, getmask.outputspec): No edge data
121117-19:31:03,297 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:03,298 workflow DEBUG:
	 (getmask.register, getmask.outputspec): Edge data exists: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:03,298 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file'), ('min_cost_file', 'reg_cost')]}
121117-19:31:03,298 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): No edge data
121117-19:31:03,298 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): new edge data: {'connect': [('binary_file', 'mask_file')]}
121117-19:31:03,315 workflow DEBUG:
	 (preproc.inputspec, preproc.getmask): No edge data
121117-19:31:03,315 workflow DEBUG:
	 (preproc.inputspec, preproc.getmask): new edge data: {'connect': [('subject_id', 'inputspec.subject_id'), ('subjects_dir', 'inputspec.subjects_dir')]}
121117-19:31:03,323 workflow DEBUG:
	 setting nodelevel(getmask.inputspec) input contrast_type = t2
121117-19:31:03,331 workflow DEBUG:
	 (preproc.realign, preproc.getmask): No edge data
121117-19:31:03,331 workflow DEBUG:
	 (preproc.realign, preproc.getmask): new edge data: {'connect': [('mean_image', 'inputspec.source_file')]}
121117-19:31:03,333 workflow DEBUG:
	 (preproc.inputspec, preproc.smooth): No edge data
121117-19:31:03,333 workflow DEBUG:
	 (preproc.inputspec, preproc.smooth): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:03,333 workflow DEBUG:
	 (preproc.realign, preproc.smooth): No edge data
121117-19:31:03,333 workflow DEBUG:
	 (preproc.realign, preproc.smooth): new edge data: {'connect': [('realigned_files', 'in_files')]}
121117-19:31:03,335 workflow DEBUG:
	 (preproc.inputspec, preproc.artdetect): No edge data
121117-19:31:03,335 workflow DEBUG:
	 (preproc.inputspec, preproc.artdetect): new edge data: {'connect': [('norm_threshold', 'norm_threshold'), ('zintensity_threshold', 'zintensity_threshold')]}
121117-19:31:03,336 workflow DEBUG:
	 (preproc.realign, preproc.artdetect): No edge data
121117-19:31:03,336 workflow DEBUG:
	 (preproc.realign, preproc.artdetect): new edge data: {'connect': [('realigned_files', 'realigned_files'), ('realignment_parameters', 'realignment_parameters')]}
121117-19:31:03,344 workflow DEBUG:
	 (preproc.getmask, preproc.artdetect): No edge data
121117-19:31:03,344 workflow DEBUG:
	 (preproc.getmask, preproc.artdetect): new edge data: {'connect': [(('outputspec.mask_file', "S'poplist = lambda x: x.pop()\\n'\n.", ()), 'mask_file')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): No edge data
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [('outputspec.reg_file', 'reg_file')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): Edge data exists: {'connect': [('outputspec.reg_file', 'reg_file')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [('outputspec.reg_file', 'reg_file'), ('outputspec.reg_cost', 'reg_cost')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): Edge data exists: {'connect': [('outputspec.reg_file', 'reg_file'), ('outputspec.reg_cost', 'reg_cost')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.getmask, preproc.outputspec): new edge data: {'connect': [('outputspec.reg_file', 'reg_file'), ('outputspec.reg_cost', 'reg_cost'), (('outputspec.mask_file', "S'poplist = lambda x: x.pop()\\n'\n.", ()), 'mask_file')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): No edge data
121117-19:31:03,367 workflow DEBUG:
	 (preproc.realign, preproc.outputspec): new edge data: {'connect': [('realignment_parameters', 'realignment_parameters')]}
121117-19:31:03,367 workflow DEBUG:
	 (preproc.smooth, preproc.outputspec): No edge data
121117-19:31:03,368 workflow DEBUG:
	 (preproc.smooth, preproc.outputspec): new edge data: {'connect': [('smoothed_files', 'smoothed_files')]}
121117-19:31:03,368 workflow DEBUG:
	 (preproc.artdetect, preproc.outputspec): No edge data
121117-19:31:03,368 workflow DEBUG:
	 (preproc.artdetect, preproc.outputspec): new edge data: {'connect': [('outlier_files', 'outlier_files'), ('statistic_files', 'outlier_stats'), ('plot_files', 'outlier_plots')]}
121117-19:31:03,372 workflow DEBUG:
	 adding multipath trait: channel_files
121117-19:31:03,373 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.segment): No edge data
121117-19:31:03,373 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.segment): new edge data: {'connect': [('structural_files', 'channel_files')]}
121117-19:31:03,373 workflow CRITICAL:
	 MATLAB not found: DARTEL not setting tissue templates
121117-19:31:03,375 workflow DEBUG:
	 (dartel_template.segment, dartel_template.dartel): No edge data
121117-19:31:03,375 workflow DEBUG:
	 (dartel_template.segment, dartel_template.dartel): new edge data: {'connect': [(('dartel_input_images', "S'def get2classes(dartel_files):\\n    class1images = []\\n    class2images = []\\n    for session in dartel_files:\\n        class1images.extend(session[0])\\n        class2images.extend(session[1])\\n    return [class1images, class2images]\\n'\n.", ()), 'image_files')]}
121117-19:31:03,376 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.dartel): No edge data
121117-19:31:03,376 workflow DEBUG:
	 (dartel_template.inputspec, dartel_template.dartel): new edge data: {'connect': [('template_prefix', 'template_prefix')]}
121117-19:31:03,377 workflow DEBUG:
	 (dartel_template.dartel, dartel_template.outputspec): No edge data
121117-19:31:03,377 workflow DEBUG:
	 (dartel_template.dartel, dartel_template.outputspec): new edge data: {'connect': [('final_template_file', 'template_file'), ('dartel_flow_fields', 'flow_fields')]}
121117-19:31:03,379 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.dartel_template): No edge data
121117-19:31:03,380 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.dartel_template): new edge data: {'connect': [('template_prefix', 'inputspec.template_prefix')]}
121117-19:31:03,382 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.dartel_template): Edge data exists: {'connect': [('template_prefix', 'inputspec.template_prefix')]}
121117-19:31:03,382 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.dartel_template): new edge data: {'connect': [('template_prefix', 'inputspec.template_prefix'), ('structural_files', 'inputspec.structural_files')]}
121117-19:31:03,386 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): No edge data
121117-19:31:03,387 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): new edge data: {'connect': [('outputspec.template_file', 'template_file')]}
121117-19:31:03,390 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): Edge data exists: {'connect': [('outputspec.template_file', 'template_file')]}
121117-19:31:03,390 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): new edge data: {'connect': [('outputspec.template_file', 'template_file'), ('outputspec.flow_fields', 'flowfield_files')]}
121117-19:31:03,394 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): Edge data exists: {'connect': [('outputspec.template_file', 'template_file'), ('outputspec.flow_fields', 'flowfield_files')]}
121117-19:31:03,394 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.norm2mni): new edge data: {'connect': [('outputspec.template_file', 'template_file'), ('outputspec.flow_fields', 'flowfield_files'), (('segment.native_class_images', "S'def getclass1images(class_images):\\n    class1images = []\\n    for session in class_images:\\n        class1images.extend(session[0])\\n    return class1images\\n'\n.", ()), 'apply_to_files')]}
121117-19:31:03,394 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.norm2mni): No edge data
121117-19:31:03,394 workflow DEBUG:
	 (vbmpreproc.inputspec, vbmpreproc.norm2mni): new edge data: {'connect': [('fwhm', 'fwhm')]}
121117-19:31:03,399 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.calc_icv): No edge data
121117-19:31:03,399 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.calc_icv): new edge data: {'connect': [('segment.native_class_images', 'class_images')]}
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.outputspec): No edge data
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.dartel_template, vbmpreproc.outputspec): new edge data: {'connect': [('outputspec.template_file', 'template_file')]}
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.norm2mni, vbmpreproc.outputspec): No edge data
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.norm2mni, vbmpreproc.outputspec): new edge data: {'connect': [('normalized_files', 'normalized_files')]}
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.calc_icv, vbmpreproc.outputspec): No edge data
121117-19:31:03,404 workflow DEBUG:
	 (vbmpreproc.calc_icv, vbmpreproc.outputspec): new edge data: {'connect': [('icv', 'icv')]}
121117-19:31:03,419 workflow DEBUG:
	 connection: dartel_template_inputspec -> dartel_template_segment;
121117-19:31:03,420 workflow DEBUG:
	 connection: dartel_template_inputspec -> dartel_template_dartel;
121117-19:31:03,420 workflow DEBUG:
	 connection: dartel_template_segment -> dartel_template_dartel;
121117-19:31:03,420 workflow DEBUG:
	 connection: dartel_template_dartel -> dartel_template_outputspec;
121117-19:31:03,458 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpEoezGn.dot to png format
121117-19:31:03,474 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_smooth;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_artdetect;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_inputspec -> preproc_realign;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_realign -> preproc_smooth;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_realign -> preproc_outputspec;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_realign -> preproc_artdetect;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_smooth -> preproc_outputspec;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_fssource;
121117-19:31:03,475 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_transform;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_inputspec -> preproc_getmask_register;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_fssource -> preproc_getmask_threshold;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_threshold -> preproc_getmask_transform;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_register -> preproc_getmask_transform;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_register -> preproc_getmask_outputspec;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_transform -> preproc_getmask_threshold2;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_getmask_threshold2 -> preproc_getmask_outputspec;
121117-19:31:03,476 workflow DEBUG:
	 connection: preproc_artdetect -> preproc_outputspec;
121117-19:31:03,476 workflow DEBUG:
	 cross connection: preproc_realign -> preproc_getmask_inputspec;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_inputspec -> preproc_getmask_inputspec;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_inputspec -> preproc_getmask_inputspec;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_artdetect;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:03,477 workflow DEBUG:
	 cross connection: preproc_getmask_outputspec -> preproc_outputspec;
121117-19:31:03,580 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpYKYOI5.dot to png format
121117-19:31:03,595 workflow DEBUG:
	 connection: vbmpreproc_inputspec -> vbmpreproc_norm2mni;
121117-19:31:03,595 workflow DEBUG:
	 connection: vbmpreproc_dartel_template_inputspec -> vbmpreproc_dartel_template_segment;
121117-19:31:03,596 workflow DEBUG:
	 connection: vbmpreproc_dartel_template_inputspec -> vbmpreproc_dartel_template_dartel;
121117-19:31:03,596 workflow DEBUG:
	 connection: vbmpreproc_dartel_template_segment -> vbmpreproc_dartel_template_dartel;
121117-19:31:03,596 workflow DEBUG:
	 connection: vbmpreproc_dartel_template_dartel -> vbmpreproc_dartel_template_outputspec;
121117-19:31:03,596 workflow DEBUG:
	 connection: vbmpreproc_norm2mni -> vbmpreproc_outputspec;
121117-19:31:03,596 workflow DEBUG:
	 connection: vbmpreproc_calc_icv -> vbmpreproc_outputspec;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_dartel_template_outputspec -> vbmpreproc_norm2mni;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_dartel_template_outputspec -> vbmpreproc_norm2mni;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_dartel_template_segment -> vbmpreproc_norm2mni;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_dartel_template_outputspec -> vbmpreproc_outputspec;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_dartel_template_segment -> vbmpreproc_calc_icv;
121117-19:31:03,596 workflow DEBUG:
	 cross connection: vbmpreproc_inputspec -> vbmpreproc_dartel_template_inputspec;
121117-19:31:03,597 workflow DEBUG:
	 cross connection: vbmpreproc_inputspec -> vbmpreproc_dartel_template_inputspec;
121117-19:31:03,657 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpSqJ7S6.dot to png format
WARNING: Empty - nipype.workflows.graph
WARNING: Empty - nipype.workflows.misc
WARNING: Empty - nipype.workflows.rsfmri
WARNING: Empty - nipype.workflows.rsfmri.fsl
121117-19:31:03,746 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:03,747 workflow DEBUG:
	 adding multipath trait: premat
121117-19:31:03,749 workflow DEBUG:
	 (realign.inputspec, realign.realigner): No edge data
121117-19:31:03,749 workflow DEBUG:
	 (realign.inputspec, realign.realigner): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:03,750 workflow DEBUG:
	 (realign.inputspec, realign.realigner): Edge data exists: {'connect': [('func', 'in_file')]}
121117-19:31:03,750 workflow DEBUG:
	 (realign.inputspec, realign.realigner): new edge data: {'connect': [('func', 'in_file'), (('func', 'S\'def select_volume(filename, which):\\n    """Return the middle index of a file\\n    """\\n    from nibabel import load\\n    import numpy as np\\n    if which.lower() == \\\'first\\\':\\n        idx = 0\\n    elif which.lower() == \\\'middle\\\':\\n        idx = int(np.ceil(load(filename).get_shape()[3]/2))\\n    else:\\n        raise Exception(\\\'unknown value for volume selection : %s\\\'%which)\\n    return idx\\n\'\n.', ('middle',)), 'ref_vol')]}
121117-19:31:03,751 workflow DEBUG:
	 (realign.realigner, realign.splitter): No edge data
121117-19:31:03,751 workflow DEBUG:
	 (realign.realigner, realign.splitter): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:03,751 workflow DEBUG:
	 (realign.realigner, realign.warper): No edge data
121117-19:31:03,751 workflow DEBUG:
	 (realign.realigner, realign.warper): new edge data: {'connect': [('mat_file', 'premat')]}
121117-19:31:03,752 workflow DEBUG:
	 (realign.realigner, realign.warper): Edge data exists: {'connect': [('mat_file', 'premat')]}
121117-19:31:03,752 workflow DEBUG:
	 (realign.realigner, realign.warper): new edge data: {'connect': [('mat_file', 'premat'), ('variance_img', 'ref_file')]}
121117-19:31:03,752 workflow DEBUG:
	 (realign.splitter, realign.warper): No edge data
121117-19:31:03,752 workflow DEBUG:
	 (realign.splitter, realign.warper): new edge data: {'connect': [('out_files', 'in_file')]}
121117-19:31:03,752 workflow DEBUG:
	 (realign.warper, realign.joiner): No edge data
121117-19:31:03,752 workflow DEBUG:
	 (realign.warper, realign.joiner): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:31:03,753 workflow DEBUG:
	 (realign.joiner, realign.outputspec): No edge data
121117-19:31:03,753 workflow DEBUG:
	 (realign.joiner, realign.outputspec): new edge data: {'connect': [('merged_file', 'realigned_file')]}
121117-19:31:03,762 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:03,763 workflow DEBUG:
	 adding multipath trait: premat
121117-19:31:03,764 workflow DEBUG:
	 (realign.inputspec, realign.realigner): No edge data
121117-19:31:03,764 workflow DEBUG:
	 (realign.inputspec, realign.realigner): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:03,767 workflow DEBUG:
	 (realign.inputspec, realign.realigner): Edge data exists: {'connect': [('func', 'in_file')]}
121117-19:31:03,768 workflow DEBUG:
	 (realign.inputspec, realign.realigner): new edge data: {'connect': [('func', 'in_file'), (('func', 'S\'def select_volume(filename, which):\\n    """Return the middle index of a file\\n    """\\n    from nibabel import load\\n    import numpy as np\\n    if which.lower() == \\\'first\\\':\\n        idx = 0\\n    elif which.lower() == \\\'middle\\\':\\n        idx = int(np.ceil(load(filename).get_shape()[3]/2))\\n    else:\\n        raise Exception(\\\'unknown value for volume selection : %s\\\'%which)\\n    return idx\\n\'\n.', ('middle',)), 'ref_vol')]}
121117-19:31:03,768 workflow DEBUG:
	 (realign.realigner, realign.splitter): No edge data
121117-19:31:03,768 workflow DEBUG:
	 (realign.realigner, realign.splitter): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:03,768 workflow DEBUG:
	 (realign.realigner, realign.warper): No edge data
121117-19:31:03,768 workflow DEBUG:
	 (realign.realigner, realign.warper): new edge data: {'connect': [('mat_file', 'premat')]}
121117-19:31:03,769 workflow DEBUG:
	 (realign.realigner, realign.warper): Edge data exists: {'connect': [('mat_file', 'premat')]}
121117-19:31:03,769 workflow DEBUG:
	 (realign.realigner, realign.warper): new edge data: {'connect': [('mat_file', 'premat'), ('variance_img', 'ref_file')]}
121117-19:31:03,769 workflow DEBUG:
	 (realign.splitter, realign.warper): No edge data
121117-19:31:03,769 workflow DEBUG:
	 (realign.splitter, realign.warper): new edge data: {'connect': [('out_files', 'in_file')]}
121117-19:31:03,769 workflow DEBUG:
	 (realign.warper, realign.joiner): No edge data
121117-19:31:03,769 workflow DEBUG:
	 (realign.warper, realign.joiner): new edge data: {'connect': [('out_file', 'in_files')]}
121117-19:31:03,769 workflow DEBUG:
	 (realign.joiner, realign.outputspec): No edge data
121117-19:31:03,770 workflow DEBUG:
	 (realign.joiner, realign.outputspec): new edge data: {'connect': [('merged_file', 'realigned_file')]}
121117-19:31:03,777 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.slicetimer): No edge data
121117-19:31:03,777 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.slicetimer): new edge data: {'connect': [('func', 'in_file')]}
121117-19:31:03,781 workflow DEBUG:
	 (restpreproc.slicetimer, restpreproc.realign): No edge data
121117-19:31:03,782 workflow DEBUG:
	 (restpreproc.slicetimer, restpreproc.realign): new edge data: {'connect': [('slice_time_corrected_file', 'inputspec.func')]}
121117-19:31:03,856 workflow DEBUG:
	 (restpreproc.realign, restpreproc.tsnr): No edge data
121117-19:31:03,856 workflow DEBUG:
	 (restpreproc.realign, restpreproc.tsnr): new edge data: {'connect': [('outputspec.realigned_file', 'in_file')]}
121117-19:31:03,856 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.threshold): No edge data
121117-19:31:03,856 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.threshold): new edge data: {'connect': [('stddev_file', 'in_file')]}
121117-19:31:03,857 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.getthreshold): No edge data
121117-19:31:03,857 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.getthreshold): new edge data: {'connect': [('stddev_file', 'in_file')]}
121117-19:31:03,857 workflow DEBUG:
	 (restpreproc.getthreshold, restpreproc.threshold): No edge data
121117-19:31:03,857 workflow DEBUG:
	 (restpreproc.getthreshold, restpreproc.threshold): new edge data: {'connect': [('out_stat', 'thresh')]}
121117-19:31:03,860 workflow DEBUG:
	 (restpreproc.realign, restpreproc.compcorr): No edge data
121117-19:31:03,860 workflow DEBUG:
	 (restpreproc.realign, restpreproc.compcorr): new edge data: {'connect': [('outputspec.realigned_file', 'realigned_file')]}
121117-19:31:03,860 workflow DEBUG:
	 (restpreproc.threshold, restpreproc.compcorr): No edge data
121117-19:31:03,860 workflow DEBUG:
	 (restpreproc.threshold, restpreproc.compcorr): new edge data: {'connect': [('out_file', 'noise_mask_file')]}
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.compcorr): No edge data
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.compcorr): new edge data: {'connect': [('num_noise_components', 'num_components')]}
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.remove_noise): No edge data
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.tsnr, restpreproc.remove_noise): new edge data: {'connect': [('detrended_file', 'in_file')]}
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.compcorr, restpreproc.remove_noise): No edge data
121117-19:31:03,861 workflow DEBUG:
	 (restpreproc.compcorr, restpreproc.remove_noise): new edge data: {'connect': [('noise_components', 'design_file')]}
121117-19:31:03,862 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.bandpass_filter): No edge data
121117-19:31:03,862 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.bandpass_filter): new edge data: {'connect': [('highpass_sigma', 'highpass_sigma')]}
121117-19:31:03,862 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.bandpass_filter): Edge data exists: {'connect': [('highpass_sigma', 'highpass_sigma')]}
121117-19:31:03,862 workflow DEBUG:
	 (restpreproc.inputspec, restpreproc.bandpass_filter): new edge data: {'connect': [('highpass_sigma', 'highpass_sigma'), ('lowpass_sigma', 'lowpass_sigma')]}
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.remove_noise, restpreproc.bandpass_filter): No edge data
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.remove_noise, restpreproc.bandpass_filter): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.threshold, restpreproc.outputspec): No edge data
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.threshold, restpreproc.outputspec): new edge data: {'connect': [('out_file', 'noise_mask_file')]}
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.bandpass_filter, restpreproc.outputspec): No edge data
121117-19:31:03,863 workflow DEBUG:
	 (restpreproc.bandpass_filter, restpreproc.outputspec): new edge data: {'connect': [('out_file', 'filtered_file')]}
121117-19:31:03,877 workflow DEBUG:
	 connection: realign_inputspec -> realign_realigner;
121117-19:31:03,878 workflow DEBUG:
	 connection: realign_realigner -> realign_splitter;
121117-19:31:03,878 workflow DEBUG:
	 connection: realign_realigner -> realign_warper;
121117-19:31:03,878 workflow DEBUG:
	 connection: realign_splitter -> realign_warper;
121117-19:31:03,878 workflow DEBUG:
	 connection: realign_warper -> realign_joiner;
121117-19:31:03,878 workflow DEBUG:
	 connection: realign_joiner -> realign_outputspec;
121117-19:31:03,938 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpSVoYB4.dot to png format
121117-19:31:03,954 workflow DEBUG:
	 connection: restpreproc_inputspec -> restpreproc_bandpass_filter;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_inputspec -> restpreproc_slicetimer;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_inputspec -> restpreproc_compcorr;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_inputspec -> restpreproc_realign_realigner;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_realigner -> restpreproc_realign_splitter;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_realigner -> restpreproc_realign_warper;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_splitter -> restpreproc_realign_warper;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_warper -> restpreproc_realign_joiner;
121117-19:31:03,955 workflow DEBUG:
	 connection: restpreproc_realign_joiner -> restpreproc_realign_outputspec;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_tsnr -> restpreproc_threshold;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_tsnr -> restpreproc_remove_noise;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_tsnr -> restpreproc_getthreshold;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_getthreshold -> restpreproc_threshold;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_threshold -> restpreproc_compcorr;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_threshold -> restpreproc_outputspec;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_compcorr -> restpreproc_remove_noise;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_remove_noise -> restpreproc_bandpass_filter;
121117-19:31:03,956 workflow DEBUG:
	 connection: restpreproc_bandpass_filter -> restpreproc_outputspec;
121117-19:31:03,956 workflow DEBUG:
	 cross connection: restpreproc_realign_outputspec -> restpreproc_tsnr;
121117-19:31:03,957 workflow DEBUG:
	 cross connection: restpreproc_realign_outputspec -> restpreproc_compcorr;
121117-19:31:03,957 workflow DEBUG:
	 cross connection: restpreproc_slicetimer -> restpreproc_realign_inputspec;
121117-19:31:04,74 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpym_10H.dot to png format
WARNING: Empty - nipype.workflows.smri
WARNING: Empty - nipype.workflows.smri.ants
121117-19:31:04,105 workflow DEBUG:
	 adding multipath trait: moving_image
121117-19:31:04,106 workflow DEBUG:
	 setting mapnode(BeginANTS) input: dimension -> 3
121117-19:31:04,106 workflow DEBUG:
	 setting mapnode(BeginANTS) input: output_transform_prefix -> _tfm
121117-19:31:04,106 workflow DEBUG:
	 setting mapnode(BeginANTS) input: metric -> ['CC']
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: metric_weight -> [1.0]
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: radius -> [5]
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: transformation_model -> SyN
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: gradient_step_length -> 0.25
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: number_of_iterations -> [50, 35, 15]
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: number_of_affine_iterations -> [10000, 10000, 10000, 10000, 10000]
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: use_histogram_matching -> True
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: mi_option -> [32, 16000]
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: regularization -> Gauss
121117-19:31:04,107 workflow DEBUG:
	 setting mapnode(BeginANTS) input: regularization_gradient_field_sigma -> 3.0
121117-19:31:04,108 workflow DEBUG:
	 setting mapnode(BeginANTS) input: regularization_deformation_field_sigma -> 0.0
121117-19:31:04,108 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.BeginANTS): No edge data
121117-19:31:04,108 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.BeginANTS): new edge data: {'connect': [('images', 'moving_image')]}
121117-19:31:04,109 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.BeginANTS): Edge data exists: {'connect': [('images', 'moving_image')]}
121117-19:31:04,109 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.BeginANTS): new edge data: {'connect': [('images', 'moving_image'), ('fixed_image', 'fixed_image')]}
121117-19:31:04,110 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists): No edge data
121117-19:31:04,111 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists): new edge data: {'connect': [('warp_transform', 'warpTransformList')]}
121117-19:31:04,111 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists): Edge data exists: {'connect': [('warp_transform', 'warpTransformList')]}
121117-19:31:04,111 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists): new edge data: {'connect': [('warp_transform', 'warpTransformList'), ('affine_transform', 'AffineTransformList')]}
121117-19:31:04,112 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,113 workflow DEBUG:
	 adding multipath trait: transformation_series
121117-19:31:04,114 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.wimtdeformed): No edge data
121117-19:31:04,114 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('images', 'input_image')]}
121117-19:31:04,114 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists, ANTSTemplateBuildSingleIterationWF_.wimtdeformed): No edge data
121117-19:31:04,114 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists, ANTSTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('out', 'transformation_series')]}
121117-19:31:04,116 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.wimtdeformed, ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages): No edge data
121117-19:31:04,116 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.wimtdeformed, ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages): new edge data: {'connect': [('output_image', 'images')]}
121117-19:31:04,117 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform): No edge data
121117-19:31:04,117 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform): new edge data: {'connect': [('affine_transform', 'transforms')]}
121117-19:31:04,118 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.AvgWarpImages): No edge data
121117-19:31:04,118 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.BeginANTS, ANTSTemplateBuildSingleIterationWF_.AvgWarpImages): new edge data: {'connect': [('warp_transform', 'images')]}
121117-19:31:04,119 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgWarpImages, ANTSTemplateBuildSingleIterationWF_.GradientStepWarpImage): No edge data
121117-19:31:04,119 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgWarpImages, ANTSTemplateBuildSingleIterationWF_.GradientStepWarpImage): new edge data: {'connect': [('output_average_image', 'first_input')]}
121117-19:31:04,120 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,120 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [('output_average_image', 'reference_image')]}
121117-19:31:04,120 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,121 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [('affine_transform', 'transformation_series')]}
121117-19:31:04,121 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.GradientStepWarpImage, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,121 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.GradientStepWarpImage, ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [('output_product_image', 'input_image')]}
121117-19:31:04,122 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform, ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps): No edge data
121117-19:31:04,122 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgAffineTransform, ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps): new edge data: {'connect': [('affine_transform', 'averageAffineTranform')]}
121117-19:31:04,122 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape, ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps): No edge data
121117-19:31:04,123 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.UpdateTemplateShape, ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps): new edge data: {'connect': [('output_image', 'gradientStepWarp')]}
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): No edge data
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): Edge data exists: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image'), ('output_average_image', 'reference_image')]}
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): No edge data
121117-19:31:04,124 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps, ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('TransformListWithGradientWarps', 'transformation_series')]}
121117-19:31:04,125 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate, ANTSTemplateBuildSingleIterationWF_.outputspec): No edge data
121117-19:31:04,125 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate, ANTSTemplateBuildSingleIterationWF_.outputspec): new edge data: {'connect': [('output_image', 'template')]}
121117-19:31:04,127 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): No edge data
121117-19:31:04,128 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.inputspec, ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('ListOfPassiveImagesDictionaries', 'ListOfPassiveImagesDictionaries')]}
121117-19:31:04,128 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists, ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): No edge data
121117-19:31:04,128 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformsLists, ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('out', 'transformation_series')]}
121117-19:31:04,129 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,130 workflow DEBUG:
	 adding multipath trait: transformation_series
121117-19:31:04,131 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): No edge data
121117-19:31:04,131 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedImages, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('output_average_image', 'reference_image')]}
121117-19:31:04,131 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): No edge data
121117-19:31:04,131 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_images', 'input_image')]}
121117-19:31:04,131 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): Edge data exists: {'connect': [('flattened_images', 'input_image')]}
121117-19:31:04,132 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_images', 'input_image'), ('flattened_transforms', 'transformation_series')]}
121117-19:31:04,134 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed, ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): No edge data
121117-19:31:04,134 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.wimtPassivedeformed, ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): new edge data: {'connect': [('output_image', 'deformedPassiveImages')]}
121117-19:31:04,135 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): No edge data
121117-19:31:04,135 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): new edge data: {'connect': [('flattened_image_nametypes', 'flattened_image_nametypes')]}
121117-19:31:04,136 workflow DEBUG:
	 adding multipath trait: images
121117-19:31:04,136 workflow DEBUG:
	 adding multipath trait: output_average_image
121117-19:31:04,136 workflow DEBUG:
	 setting mapnode(AvgDeformedPassiveImages) input: dimension -> 3
121117-19:31:04,137 workflow DEBUG:
	 setting mapnode(AvgDeformedPassiveImages) input: normalize -> False
121117-19:31:04,137 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): No edge data
121117-19:31:04,137 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): new edge data: {'connect': [('nested_imagetype_list', 'images')]}
121117-19:31:04,137 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): Edge data exists: {'connect': [('nested_imagetype_list', 'images')]}
121117-19:31:04,138 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): new edge data: {'connect': [('nested_imagetype_list', 'images'), ('outputAverageImageName_list', 'output_average_image')]}
121117-19:31:04,139 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,139 workflow DEBUG:
	 adding multipath trait: out_postfix
121117-19:31:04,139 workflow DEBUG:
	 adding multipath trait: reference_image
121117-19:31:04,140 workflow DEBUG:
	 setting mapnode(ReshapeAveragePassiveImageWithShapeUpdate) input: invert_affine -> [1]
121117-19:31:04,140 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,140 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('image_type_list', 'out_postfix')]}
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): Edge data exists: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image'), ('output_average_image', 'reference_image')]}
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,141 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.MakeTransformListWithGradientWarps, ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('TransformListWithGradientWarps', 'transformation_series')]}
121117-19:31:04,142 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate, ANTSTemplateBuildSingleIterationWF_.outputspec): No edge data
121117-19:31:04,142 workflow DEBUG:
	 (ANTSTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate, ANTSTemplateBuildSingleIterationWF_.outputspec): new edge data: {'connect': [('output_image', 'passive_deformed_templates')]}
121117-19:31:04,163 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__inputspec -> ANTSTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__inputspec -> ANTSTemplateBuildSingleIterationWF__BeginANTS;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__inputspec -> ANTSTemplateBuildSingleIterationWF__wimtdeformed;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__BeginANTS -> ANTSTemplateBuildSingleIterationWF__AvgWarpImages;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__BeginANTS -> ANTSTemplateBuildSingleIterationWF__MakeTransformsLists;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__BeginANTS -> ANTSTemplateBuildSingleIterationWF__AvgAffineTransform;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgWarpImages -> ANTSTemplateBuildSingleIterationWF__GradientStepWarpImage;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgAffineTransform -> ANTSTemplateBuildSingleIterationWF__MakeTransformListWithGradientWarps;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgAffineTransform -> ANTSTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__MakeTransformsLists -> ANTSTemplateBuildSingleIterationWF__wimtdeformed;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__MakeTransformsLists -> ANTSTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__wimtdeformed -> ANTSTemplateBuildSingleIterationWF__AvgDeformedImages;
121117-19:31:04,164 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgDeformedImages -> ANTSTemplateBuildSingleIterationWF__wimtPassivedeformed;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgDeformedImages -> ANTSTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgDeformedImages -> ANTSTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList -> ANTSTemplateBuildSingleIterationWF__wimtPassivedeformed;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList -> ANTSTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__GradientStepWarpImage -> ANTSTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__UpdateTemplateShape -> ANTSTemplateBuildSingleIterationWF__MakeTransformListWithGradientWarps;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__MakeTransformListWithGradientWarps -> ANTSTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__MakeTransformListWithGradientWarps -> ANTSTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate -> ANTSTemplateBuildSingleIterationWF__outputspec;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__wimtPassivedeformed -> ANTSTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages;
121117-19:31:04,165 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages -> ANTSTemplateBuildSingleIterationWF__AvgDeformedPassiveImages;
121117-19:31:04,166 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages -> ANTSTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,166 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__AvgDeformedPassiveImages -> ANTSTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,166 workflow DEBUG:
	 connection: ANTSTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate -> ANTSTemplateBuildSingleIterationWF__outputspec;
121117-19:31:04,322 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmp0LPtAo.dot to png format
121117-19:31:04,383 workflow DEBUG:
	 adding multipath trait: moving_image
121117-19:31:04,385 workflow DEBUG:
	 setting mapnode(BeginANTS) input: output_transform_prefix -> _tfm
121117-19:31:04,385 workflow DEBUG:
	 setting mapnode(BeginANTS) input: transforms -> ['Affine', 'SyN']
121117-19:31:04,385 workflow DEBUG:
	 setting mapnode(BeginANTS) input: transform_parameters -> [(0.9,), (0.25, 3.0, 0.0)]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: metric -> ['Mattes', 'CC']
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: metric_weight -> [1.0, 1.0]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: radius_or_number_of_bins -> [32, 5]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: number_of_iterations -> [[1000, 1000, 1000], [50, 35, 15]]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: use_histogram_matching -> [True, True]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: use_estimate_learning_rate_once -> [False, False]
121117-19:31:04,386 workflow DEBUG:
	 setting mapnode(BeginANTS) input: shrink_factors -> [[3, 2, 1], [3, 2, 1]]
121117-19:31:04,387 workflow DEBUG:
	 setting mapnode(BeginANTS) input: smoothing_sigmas -> [[3, 2, 0], [3, 2, 0]]
121117-19:31:04,389 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): No edge data
121117-19:31:04,389 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): new edge data: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries')]}
121117-19:31:04,390 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): Edge data exists: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries')]}
121117-19:31:04,390 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): new edge data: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries'), ('registrationImageTypes', 'registrationImageTypes')]}
121117-19:31:04,390 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): Edge data exists: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries'), ('registrationImageTypes', 'registrationImageTypes')]}
121117-19:31:04,390 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode): new edge data: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries'), ('registrationImageTypes', 'registrationImageTypes'), ('interpolationMapping', 'interpolationMapping')]}
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): No edge data
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): new edge data: {'connect': [('moving_images', 'moving_image')]}
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): Edge data exists: {'connect': [('moving_images', 'moving_image')]}
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): new edge data: {'connect': [('moving_images', 'moving_image'), ('moving_interpolation_type', 'interpolation')]}
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): No edge data
121117-19:31:04,391 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS): new edge data: {'connect': [('fixed_image', 'fixed_image')]}
121117-19:31:04,393 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,393 workflow DEBUG:
	 adding multipath trait: invert_transform_flags
121117-19:31:04,394 workflow DEBUG:
	 adding multipath trait: transforms
121117-19:31:04,394 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): No edge data
121117-19:31:04,395 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('forward_transforms', 'transforms')]}
121117-19:31:04,395 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): Edge data exists: {'connect': [('forward_transforms', 'transforms')]}
121117-19:31:04,395 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('forward_transforms', 'transforms'), ('forward_invert_flags', 'invert_transform_flags')]}
121117-19:31:04,395 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): No edge data
121117-19:31:04,395 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetMovingImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('moving_images', 'input_image')]}
121117-19:31:04,396 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): No edge data
121117-19:31:04,396 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed): new edge data: {'connect': [('fixed_image', 'reference_image')]}
121117-19:31:04,397 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages): No edge data
121117-19:31:04,397 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.wimtdeformed, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages): new edge data: {'connect': [('output_image', 'images')]}
121117-19:31:04,400 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode): No edge data
121117-19:31:04,400 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode): new edge data: {'connect': [('forward_transforms', 'list_of_transforms_lists')]}
121117-19:31:04,400 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode, antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform): No edge data
121117-19:31:04,400 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode, antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform): new edge data: {'connect': [('affine_component_list', 'transforms')]}
121117-19:31:04,401 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode, antsRegistrationTemplateBuildSingleIterationWF_.AvgWarpImages): No edge data
121117-19:31:04,401 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_SplitAffineAndWarpsNode, antsRegistrationTemplateBuildSingleIterationWF_.AvgWarpImages): new edge data: {'connect': [('warp_component_list', 'images')]}
121117-19:31:04,402 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgWarpImages, antsRegistrationTemplateBuildSingleIterationWF_.GradientStepWarpImage): No edge data
121117-19:31:04,402 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgWarpImages, antsRegistrationTemplateBuildSingleIterationWF_.GradientStepWarpImage): new edge data: {'connect': [('output_average_image', 'first_input')]}
121117-19:31:04,403 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,404 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [('output_average_image', 'reference_image')]}
121117-19:31:04,404 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,404 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [(('affine_transform', "S'def makeListOfOneElement(inputFile):\\n    outputList=[inputFile]\\n    return outputList\\n'\n.", ()), 'transforms')]}
121117-19:31:04,404 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.GradientStepWarpImage, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): No edge data
121117-19:31:04,404 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.GradientStepWarpImage, antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape): new edge data: {'connect': [('output_product_image', 'input_image')]}
121117-19:31:04,406 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform, antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps): No edge data
121117-19:31:04,406 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgAffineTransform, antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps): new edge data: {'connect': [('affine_transform', 'averageAffineTranform')]}
121117-19:31:04,406 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape, antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps): No edge data
121117-19:31:04,406 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.UpdateTemplateShape, antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps): new edge data: {'connect': [('output_image', 'gradientStepWarp')]}
121117-19:31:04,407 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): No edge data
121117-19:31:04,407 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): Edge data exists: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image'), ('output_average_image', 'reference_image')]}
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): No edge data
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate): new edge data: {'connect': [('TransformListWithGradientWarps', 'transforms')]}
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate, antsRegistrationTemplateBuildSingleIterationWF_.outputspec): No edge data
121117-19:31:04,408 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAverageImageWithShapeUpdate, antsRegistrationTemplateBuildSingleIterationWF_.outputspec): new edge data: {'connect': [('output_image', 'template')]}
121117-19:31:04,414 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode): No edge data
121117-19:31:04,414 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode): new edge data: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries')]}
121117-19:31:04,414 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode): Edge data exists: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries')]}
121117-19:31:04,414 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode): new edge data: {'connect': [('ListOfImagesDictionaries', 'ListOfImagesDictionaries'), ('registrationImageTypes', 'registrationImageTypes')]}
121117-19:31:04,415 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): No edge data
121117-19:31:04,415 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_GetPassiveImagesNode, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('ListOfPassiveImagesDictionaries', 'ListOfPassiveImagesDictionaries')]}
121117-19:31:04,415 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): No edge data
121117-19:31:04,415 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('interpolationMapping', 'interpolationMapping')]}
121117-19:31:04,416 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): No edge data
121117-19:31:04,416 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('forward_transforms', 'transforms')]}
121117-19:31:04,416 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): Edge data exists: {'connect': [('forward_transforms', 'transforms')]}
121117-19:31:04,416 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.BeginANTS, antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList): new edge data: {'connect': [('forward_transforms', 'transforms'), ('forward_invert_flags', 'invert_transform_flags')]}
121117-19:31:04,417 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,418 workflow DEBUG:
	 adding multipath trait: interpolation
121117-19:31:04,418 workflow DEBUG:
	 adding multipath trait: invert_transform_flags
121117-19:31:04,418 workflow DEBUG:
	 adding multipath trait: transforms
121117-19:31:04,419 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): No edge data
121117-19:31:04,419 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedImages, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('output_average_image', 'reference_image')]}
121117-19:31:04,419 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): No edge data
121117-19:31:04,419 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_interpolation_type', 'interpolation')]}
121117-19:31:04,420 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): Edge data exists: {'connect': [('flattened_interpolation_type', 'interpolation')]}
121117-19:31:04,420 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_interpolation_type', 'interpolation'), ('flattened_images', 'input_image')]}
121117-19:31:04,420 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): Edge data exists: {'connect': [('flattened_interpolation_type', 'interpolation'), ('flattened_images', 'input_image')]}
121117-19:31:04,421 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_interpolation_type', 'interpolation'), ('flattened_images', 'input_image'), ('flattened_transforms', 'transforms')]}
121117-19:31:04,421 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): Edge data exists: {'connect': [('flattened_interpolation_type', 'interpolation'), ('flattened_images', 'input_image'), ('flattened_transforms', 'transforms')]}
121117-19:31:04,421 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed): new edge data: {'connect': [('flattened_interpolation_type', 'interpolation'), ('flattened_images', 'input_image'), ('flattened_transforms', 'transforms'), ('flattened_invert_transform_flags', 'invert_transform_flags')]}
121117-19:31:04,424 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): No edge data
121117-19:31:04,424 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.inputspec, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): new edge data: {'connect': [('interpolationMapping', 'interpolationMapping')]}
121117-19:31:04,425 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): No edge data
121117-19:31:04,425 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.wimtPassivedeformed, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): new edge data: {'connect': [('output_image', 'deformedPassiveImages')]}
121117-19:31:04,425 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): No edge data
121117-19:31:04,425 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_FlattenTransformAndImagesList, antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages): new edge data: {'connect': [('flattened_image_nametypes', 'flattened_image_nametypes')]}
121117-19:31:04,426 workflow DEBUG:
	 adding multipath trait: images
121117-19:31:04,427 workflow DEBUG:
	 adding multipath trait: output_average_image
121117-19:31:04,427 workflow DEBUG:
	 setting mapnode(AvgDeformedPassiveImages) input: dimension -> 3
121117-19:31:04,427 workflow DEBUG:
	 setting mapnode(AvgDeformedPassiveImages) input: normalize -> False
121117-19:31:04,427 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): No edge data
121117-19:31:04,428 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): new edge data: {'connect': [('nested_imagetype_list', 'images')]}
121117-19:31:04,428 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): Edge data exists: {'connect': [('nested_imagetype_list', 'images')]}
121117-19:31:04,428 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages): new edge data: {'connect': [('nested_imagetype_list', 'images'), ('outputAverageImageName_list', 'output_average_image')]}
121117-19:31:04,429 workflow DEBUG:
	 adding multipath trait: input_image
121117-19:31:04,430 workflow DEBUG:
	 adding multipath trait: interpolation
121117-19:31:04,430 workflow DEBUG:
	 adding multipath trait: output_image
121117-19:31:04,430 workflow DEBUG:
	 adding multipath trait: reference_image
121117-19:31:04,431 workflow DEBUG:
	 setting mapnode(ReshapeAveragePassiveImageWithShapeUpdate) input: invert_transform_flags -> [True, False, False, False, False]
121117-19:31:04,431 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,431 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('nested_interpolation_type', 'interpolation')]}
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): Edge data exists: {'connect': [('nested_interpolation_type', 'interpolation')]}
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_RenestDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('nested_interpolation_type', 'interpolation'), ('outputAverageImageName_list', 'output_image')]}
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): Edge data exists: {'connect': [('output_average_image', 'input_image')]}
121117-19:31:04,432 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.AvgDeformedPassiveImages, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('output_average_image', 'input_image'), ('output_average_image', 'reference_image')]}
121117-19:31:04,433 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): No edge data
121117-19:31:04,433 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.99_MakeTransformListWithGradientWarps, antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate): new edge data: {'connect': [('TransformListWithGradientWarps', 'transforms')]}
121117-19:31:04,433 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate, antsRegistrationTemplateBuildSingleIterationWF_.outputspec): No edge data
121117-19:31:04,433 workflow DEBUG:
	 (antsRegistrationTemplateBuildSingleIterationWF_.ReshapeAveragePassiveImageWithShapeUpdate, antsRegistrationTemplateBuildSingleIterationWF_.outputspec): new edge data: {'connect': [('output_image', 'passive_deformed_templates')]}
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__99_GetMovingImagesNode;
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages;
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__wimtdeformed;
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__BeginANTS;
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__99_GetPassiveImagesNode;
121117-19:31:04,457 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__inputspec -> antsRegistrationTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_GetPassiveImagesNode -> antsRegistrationTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_GetMovingImagesNode -> antsRegistrationTemplateBuildSingleIterationWF__BeginANTS;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_GetMovingImagesNode -> antsRegistrationTemplateBuildSingleIterationWF__wimtdeformed;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__BeginANTS -> antsRegistrationTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__BeginANTS -> antsRegistrationTemplateBuildSingleIterationWF__wimtdeformed;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__BeginANTS -> antsRegistrationTemplateBuildSingleIterationWF__99_SplitAffineAndWarpsNode;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList -> antsRegistrationTemplateBuildSingleIterationWF__wimtPassivedeformed;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_FlattenTransformAndImagesList -> antsRegistrationTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_SplitAffineAndWarpsNode -> antsRegistrationTemplateBuildSingleIterationWF__AvgAffineTransform;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_SplitAffineAndWarpsNode -> antsRegistrationTemplateBuildSingleIterationWF__AvgWarpImages;
121117-19:31:04,458 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgAffineTransform -> antsRegistrationTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgAffineTransform -> antsRegistrationTemplateBuildSingleIterationWF__99_MakeTransformListWithGradientWarps;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgWarpImages -> antsRegistrationTemplateBuildSingleIterationWF__GradientStepWarpImage;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__GradientStepWarpImage -> antsRegistrationTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__wimtdeformed -> antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedImages;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedImages -> antsRegistrationTemplateBuildSingleIterationWF__UpdateTemplateShape;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedImages -> antsRegistrationTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedImages -> antsRegistrationTemplateBuildSingleIterationWF__wimtPassivedeformed;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__UpdateTemplateShape -> antsRegistrationTemplateBuildSingleIterationWF__99_MakeTransformListWithGradientWarps;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_MakeTransformListWithGradientWarps -> antsRegistrationTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_MakeTransformListWithGradientWarps -> antsRegistrationTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__ReshapeAverageImageWithShapeUpdate -> antsRegistrationTemplateBuildSingleIterationWF__outputspec;
121117-19:31:04,459 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__wimtPassivedeformed -> antsRegistrationTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages;
121117-19:31:04,460 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages -> antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedPassiveImages;
121117-19:31:04,460 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__99_RenestDeformedPassiveImages -> antsRegistrationTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,460 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__AvgDeformedPassiveImages -> antsRegistrationTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate;
121117-19:31:04,460 workflow DEBUG:
	 connection: antsRegistrationTemplateBuildSingleIterationWF__ReshapeAveragePassiveImageWithShapeUpdate -> antsRegistrationTemplateBuildSingleIterationWF__outputspec;
121117-19:31:04,629 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpsfb4nG.dot to png format
WARNING: Empty - nipype.workflows.smri.freesurfer
121117-19:31:04,721 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:04,723 workflow DEBUG:
	 (bem.inputspec, bem.WatershedBEM): No edge data
121117-19:31:04,723 workflow DEBUG:
	 (bem.inputspec, bem.WatershedBEM): new edge data: {'connect': [('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir')]}
121117-19:31:04,723 workflow DEBUG:
	 (bem.WatershedBEM, bem.surfconvert): No edge data
121117-19:31:04,724 workflow DEBUG:
	 (bem.WatershedBEM, bem.surfconvert): new edge data: {'connect': [('mesh_files', 'in_file')]}
121117-19:31:04,725 workflow DEBUG:
	 (bem.surfconvert, bem.outputspec): No edge data
121117-19:31:04,725 workflow DEBUG:
	 (bem.surfconvert, bem.outputspec): new edge data: {'connect': [('converted', 'meshes')]}
121117-19:31:04,738 workflow DEBUG:
	 connection: bem_inputspec -> bem_WatershedBEM;
121117-19:31:04,738 workflow DEBUG:
	 connection: bem_WatershedBEM -> bem_surfconvert;
121117-19:31:04,738 workflow DEBUG:
	 connection: bem_surfconvert -> bem_outputspec;
121117-19:31:04,776 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpkc53SO.dot to png format
121117-19:31:04,784 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:04,785 workflow DEBUG:
	 adding multipath trait: segmentation_file
121117-19:31:04,786 workflow DEBUG:
	 (getstats.inputspec, getstats.segstats): No edge data
121117-19:31:04,786 workflow DEBUG:
	 (getstats.inputspec, getstats.segstats): new edge data: {'connect': [('label_file', 'segmentation_file')]}
121117-19:31:04,786 workflow DEBUG:
	 (getstats.inputspec, getstats.segstats): Edge data exists: {'connect': [('label_file', 'segmentation_file')]}
121117-19:31:04,786 workflow DEBUG:
	 (getstats.inputspec, getstats.segstats): new edge data: {'connect': [('label_file', 'segmentation_file'), ('source_file', 'in_file')]}
121117-19:31:04,787 workflow DEBUG:
	 (getstats.segstats, getstats.outputspec): No edge data
121117-19:31:04,787 workflow DEBUG:
	 (getstats.segstats, getstats.outputspec): new edge data: {'connect': [('summary_file', 'stats_file')]}
121117-19:31:04,794 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:04,796 workflow DEBUG:
	 adding multipath trait: reg_file
121117-19:31:04,796 workflow DEBUG:
	 adding multipath trait: source_file
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): No edge data
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.fssource): new edge data: {'connect': [('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir')]}
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.register): No edge data
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.register): new edge data: {'connect': [('source_file', 'source_file'), ('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir'), ('contrast_type', 'contrast_type')]}
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): No edge data
121117-19:31:04,800 workflow DEBUG:
	 (getmask.inputspec, getmask.transform): new edge data: {'connect': [('subjects_dir', 'subjects_dir'), ('source_file', 'source_file')]}
121117-19:31:04,800 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): No edge data
121117-19:31:04,801 workflow DEBUG:
	 (getmask.fssource, getmask.threshold): new edge data: {'connect': [(('aparc_aseg', 'S\'def get_aparc_aseg(files):\\n    """Return the aparc+aseg.mgz file"""\\n    for name in files:\\n        if \\\'aparc+aseg\\\' in name:\\n            return name\\n    raise ValueError(\\\'aparc+aseg.mgz not found\\\')\\n\'\n.', ()), 'in_file')]}
121117-19:31:04,801 workflow DEBUG:
	 (getmask.register, getmask.transform): No edge data
121117-19:31:04,801 workflow DEBUG:
	 (getmask.register, getmask.transform): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:04,801 workflow DEBUG:
	 (getmask.threshold, getmask.transform): No edge data
121117-19:31:04,801 workflow DEBUG:
	 (getmask.threshold, getmask.transform): new edge data: {'connect': [('binary_file', 'target_file')]}
121117-19:31:04,803 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:04,804 workflow DEBUG:
	 setting mapnode(threshold2) input: dilate -> 1
121117-19:31:04,804 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): No edge data
121117-19:31:04,804 workflow DEBUG:
	 (getmask.transform, getmask.threshold2): new edge data: {'connect': [('transformed_file', 'in_file')]}
121117-19:31:04,806 workflow DEBUG:
	 (getmask.register, getmask.outputspec): No edge data
121117-19:31:04,806 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:04,806 workflow DEBUG:
	 (getmask.register, getmask.outputspec): Edge data exists: {'connect': [('out_reg_file', 'reg_file')]}
121117-19:31:04,806 workflow DEBUG:
	 (getmask.register, getmask.outputspec): new edge data: {'connect': [('out_reg_file', 'reg_file'), ('min_cost_file', 'reg_cost')]}
121117-19:31:04,807 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): No edge data
121117-19:31:04,807 workflow DEBUG:
	 (getmask.threshold2, getmask.outputspec): new edge data: {'connect': [('binary_file', 'mask_file')]}
121117-19:31:04,812 workflow DEBUG:
	 adding multipath trait: label_value
121117-19:31:04,812 workflow DEBUG:
	 adding multipath trait: out_file
121117-19:31:04,814 workflow DEBUG:
	 adding multipath trait: in_file
121117-19:31:04,817 workflow DEBUG:
	 adding multipath trait: in_file1
121117-19:31:04,818 workflow DEBUG:
	 setting mapnode(smoother) input: save_as_stl -> True
121117-19:31:04,818 workflow DEBUG:
	 setting mapnode(smoother) input: laplacian_smoothing_steps -> 1
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.inputspec, tessellate.fssource): No edge data
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.inputspec, tessellate.fssource): new edge data: {'connect': [('subject_id', 'subject_id'), ('subjects_dir', 'subjects_dir')]}
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.fssource, tessellate.volconvert): No edge data
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.fssource, tessellate.volconvert): new edge data: {'connect': [('aseg', 'in_file')]}
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.volconvert, tessellate.region_list_from_volume_node): No edge data
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.volconvert, tessellate.region_list_from_volume_node): new edge data: {'connect': [('out_file', 'in_file')]}
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.region_list_from_volume_node, tessellate.tessellate): No edge data
121117-19:31:04,824 workflow DEBUG:
	 (tessellate.region_list_from_volume_node, tessellate.tessellate): new edge data: {'connect': [('region_list', 'label_value')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.region_list_from_volume_node, tessellate.id_list_from_lookup_table_node): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.region_list_from_volume_node, tessellate.id_list_from_lookup_table_node): new edge data: {'connect': [('region_list', 'region_list')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.inputspec, tessellate.id_list_from_lookup_table_node): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.inputspec, tessellate.id_list_from_lookup_table_node): new edge data: {'connect': [('lookup_file', 'lookup_file')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.id_list_from_lookup_table_node, tessellate.tessellate): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.id_list_from_lookup_table_node, tessellate.tessellate): new edge data: {'connect': [('id_list', 'out_file')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.fssource, tessellate.tessellate): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.fssource, tessellate.tessellate): new edge data: {'connect': [('aseg', 'in_file')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.tessellate, tessellate.surfconvert): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.tessellate, tessellate.surfconvert): new edge data: {'connect': [('surface', 'in_file')]}
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.surfconvert, tessellate.smoother): No edge data
121117-19:31:04,825 workflow DEBUG:
	 (tessellate.surfconvert, tessellate.smoother): new edge data: {'connect': [('converted', 'in_file1')]}
121117-19:31:04,826 workflow DEBUG:
	 (tessellate.smoother, tessellate.outputspec): No edge data
121117-19:31:04,827 workflow DEBUG:
	 (tessellate.smoother, tessellate.outputspec): new edge data: {'connect': [('mesh_file', 'meshes')]}
121117-19:31:04,841 workflow DEBUG:
	 connection: getstats_inputspec -> getstats_segstats;
121117-19:31:04,841 workflow DEBUG:
	 connection: getstats_segstats -> getstats_outputspec;
121117-19:31:04,876 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpfUM6a_.dot to png format
121117-19:31:04,891 workflow DEBUG:
	 connection: getmask_inputspec -> getmask_transform;
121117-19:31:04,891 workflow DEBUG:
	 connection: getmask_inputspec -> getmask_fssource;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_inputspec -> getmask_register;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_register -> getmask_transform;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_register -> getmask_outputspec;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_fssource -> getmask_threshold;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_threshold -> getmask_transform;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_transform -> getmask_threshold2;
121117-19:31:04,892 workflow DEBUG:
	 connection: getmask_threshold2 -> getmask_outputspec;
121117-19:31:04,947 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpx5jiH7.dot to png format
121117-19:31:04,963 workflow DEBUG:
	 connection: tessellate_inputspec -> tessellate_fssource;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_inputspec -> tessellate_id_list_from_lookup_table_node;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_fssource -> tessellate_volconvert;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_fssource -> tessellate_tessellate;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_volconvert -> tessellate_region_list_from_volume_node;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_region_list_from_volume_node -> tessellate_tessellate;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_region_list_from_volume_node -> tessellate_id_list_from_lookup_table_node;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_id_list_from_lookup_table_node -> tessellate_tessellate;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_tessellate -> tessellate_surfconvert;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_surfconvert -> tessellate_smoother;
121117-19:31:04,964 workflow DEBUG:
	 connection: tessellate_smoother -> tessellate_outputspec;
121117-19:31:05,35 workflow INFO:
	 Converting dotfile: /var/folders/qr/mktzqkw525sfbq85mnwcrlx00000gq/T/tmpwNi2hQ.dot to png format
WARNING: Empty - nipype.workflows.warp
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build succeeded, 382 warnings.

Build finished. The HTML pages are in _build/html.
Build HTML and API finished.
rm -rf build
find . -name "*.pyc" | xargs rm -f
find . -name "*.so" | xargs rm -f
find . -name "*.pyd" | xargs rm -f
rm -f tags
python setup.py build_ext -i
running build_ext
nosetests -s nipype --with-doctest
Exception occurred in traits notification handler.
Please check the log file for details.
Implements common interface functionality.

Implements
----------

* Initializes inputs/outputs from input_spec/output_spec
* Provides help based on input_spec and output_spec
* Checks for mandatory inputs before running an interface
* Runs an interface and returns results
* Determines which inputs should be copied or linked to cwd

This class does not implement aggregate_outputs, input_spec or
output_spec. These should be defined by derived classes.

This class cannot be instantiated.

Inputs::

	[Mandatory]

	[Optional]
	ignore_exception: (a boolean, nipype default value: False)
		Print an error message instead of throwing an exception in case the interface fails to
		run

Outputs::

	None


Inputs::

	[Mandatory]
	goo: (an integer)
		a random int

	[Optional]
	foo: (an integer)
		a random int
	hoo: (an integer, nipype default value: 0)
		a random int
	woo: (a file name)
		a file
	zoo: (a file name)
		a file

Outputs::

	None


Inputs::

	[Mandatory]
	goo: (an integer)
		a random int

	[Optional]
	foo: (an integer)
		a random int
	hoo: (an integer, nipype default value: 0)
		a random int
	woo: (a file name)
		a file
	zoo: (a file name)
		a file

Outputs::

	foo: (an integer)
		a random int

removed spaces
built docs
ran test
