afni (0.20130815~dfsg.1-1~nd11.04+1) natty; urgency=low

  * Backported for natty.
  * Used following sed expression to modify debian/control: -e
    's/\(^Depends:\) */\1 neurodebian-popularity-contest, /g' -e
    's/^Maintainer:.*$/Maintainer: NeuroDebian Maintainers
    <team@neuro.debian.net>\nX-Original-&/'.

 -- NeuroDebian Maintainers <team@neuro.debian.net>  Sat, 17 Aug 2013 17:33:30 -0400

afni (0.20130815~dfsg.1-1) neurodebian; urgency=low

  * Fresh upstream snapshot
  * debian/rules -- AFNI_BUILD_WITH_LESSTIF2:BOOL=OFF to actually build
    against Open Motif as we thought we were doing since 2010 ;)

 -- Yaroslav Halchenko <debian@onerussian.com>  Sat, 17 Aug 2013 09:39:38 -0400

afni (0.20130813~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code, mostly compilation fixes

 -- Alex Waite <Alexqw85@gmail.com>  Wed, 14 Aug 2013 10:46:43 +0200

afni (0.20130809~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code; updated CMake. Adds 3dUnifize, 3dNwarpCat,
    3dLocalHistog, 3dNwarpAdjust, 3dNwarpFuncs, 3dTproject, @compute_gcor,
    3dLME, @move.to.series.dirs, @toMNI_Awarp, @toMNI_Qwarpar, @simulate_motion
    HalloSuma, afni_system_check.py, auto_warp.py, 3dROIMaker, 3dMatch,
    3dNetCorr, meicaX.py, optcom.py, optcom_surf.py, t2smap.py, tedanaX.py
  * Patches accepted upstream: up_secure_snprintf

 -- Alex Waite <Alexqw85@gmail.com>  Mon, 12 Aug 2013 18:23:22 +0200

afni (0.20121123~dfsg.1-2) neurodebian; urgency=low

  * Add afni-dbg package to provide debug symbols
  * debian/patches:
    - up_3rd_no_RefreshHTML_AtEvent -- to not even mention
      RefreshHTML from the patched XmHTML
    - up_condition_dset_unload -- avoid dereferencing NULL
    - cmake_sharedlibs:
      - link against lib3DEdge after libSUMA, since otherwise
        binaries do not get linked against it on Ubuntu systems
      - no need to manually extend list of libraries for
        SUMA_Map_SurfacetoSurface since it is added to the
        PROGRAMS and they are all linked against SUMA_LIBS
  * debian/rules:
    - since we --allow-shlib-undefined (because of the plugins)
      added a primitive check for few SUMA commands that they link
      against SUMA and 3DEdge libraries

 -- Yaroslav Halchenko <debian@onerussian.com>  Tue, 04 Jun 2013 11:08:09 -0400

afni (0.20121123~dfsg.1-1) neurodebian; urgency=low

  [ Michael Hanke, Yaroslav Halchenko ]
  * New upstream code. Updated CMake build system:
    - 3dedge library is now GPL-ed, thus not stripped
    - New scripts: meica.py (requires nibabel and MDP, now Recommended)
  * Built with OpenMP support (libgomp1 dependency added)
  * New patches: up_pragma_var_definition, up_glut_init,
    up_meica_tedana_upstream_mdp_api, up_meica_fixes, up_secure_sprintf
  * Enabled hardening (where applicable)

 -- Yaroslav Halchenko <debian@onerussian.com>  Wed, 28 Nov 2012 14:59:31 -0500

afni (0.20120420~dfsg.1-1) UNRELEASED; urgency=low

  [ Alex Waite]
  * New upstream code; updated CMake. Adds 3dCountSpikes, 3dNwarpCalc,
    @Quiet_Talkers and @radial_correlate
  * Upstream: New R scripts: 1dRplot.R and 3dICC_REML.R
  * Upstream: New Python scripts: gen_group_command.py,
    gen_ss_review_scripts.py, make_pq_script.py, slow_surf_clustsim.py,
    uber_align_test.py, uber_proc.py, uber_skel.py, uber_subject.py
    and uber_ttest.py
  * Upstream: Major improvements to 3dSurfMask for mask creation and
    voxel distance computations.  See examples under 3dSurfMask -help.
  * Upstream: You can have multiple instances of programs talk to eachother.
  * Upstream: Generic Atlas Support and new atlases.  Cytoarchitectonic
    atlases from Zilles, Eickhoff updated to 1.8.  Three new probabilistic
    atlases from the Desai group.
  * Upstream: New AFNI tips system has better formatting and includes images.
  * Upstream: afni_proc.py now processes surface data.
  * Fixed missing qhull dependency for 3dSkullStrip

  [ Michael Hanke ]
  * Added build-dependency on xmhtml1-dev for "new" tooltip system.

  [ Alex Waite ]
  * New upstream code. Updated CMake build system.
  * Upstream: New I/O library for R uses AFNI's c library.
  * Upstream: Web-based access atlases available. Able to query web atlases
    from whereami and open webpages.
  * Upstream new programs: dicom_hinfo, apsearch, quick.alpha.vals.py, 3dLSS,
    @AfniEnv, @Atlasize, 1dBport, SurfExtrema, 3dinfill, 3dNormalityTest,
    3dTnorm
  * Upstream: Many bug fixes and overall code cleanup.
  * Now build and ship libSUMAGTS.so

 -- Alex Waite <alexqw85@gmail.com>  Wed, 25 Apr 2012 18:58:59 +0200

afni (0.20110610~dfsg.1-1) UNRELEASED; urgency=low

  [ Alex Waite ]
  * New upstream code. Updated CMake build system.

  [ Michael Hanke ]
  * Upstream introduced circular dependencies between the internal libraries,
    hence linking is now done with --allow-shlib-undefined.
  * Added get-orig-source target to debian/rules.

 -- Michael Hanke <mih@debian.org>  Wed, 22 Jun 2011 15:21:32 -0400

afni (0.20101222~dfsg.1-3) UNRELEASED; urgency=low

  * Added patch to let @FindAfniDsetPath also search AFNI_TTATLAS_DATASET -- a
    configuration setting that is supported by thd_ttatlas_query.c and used by
    the Debian setup. Thanks to Alex Waite for the bug report.

 -- Michael Hanke <mih@debian.org>  Mon, 17 Jan 2011 12:46:45 -0500

afni (0.20101222~dfsg.1-2) UNRELEASED; urgency=low

  * Install @RetinoProc which has been left-out accidentally.
  * Bugfix of @RetinoProc to work with Debian's 3dSkullStrip.
  * Install AFNI's Matlab library.
  * Added 'r-base' as a suggested dependency.
  * Added 'python' as a recommended dependency.

 -- Michael Hanke <mih@debian.org>  Wed, 05 Jan 2011 13:55:16 -0500

afni (0.20101222~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code. Adds tools: niccc, 3dkmeans, 3dRankizer, 3dXYZcat. Adds
    scripts: @ElectroGrid, ExamineXmat, 1dRplot, @2dwarper.Allin, @help.AFNI.
    Adds plugin: plug_aslA3D3.
  * Updated CMake patch.
  * Merged some small portion of the shared libarary related patches with
    upstream.
  * Make afni_wrapper more robust. Thanks to Alex Waite for the patch.

 -- Michael Hanke <mih@debian.org>  Thu, 23 Dec 2010 11:34:20 -0500

afni (0.20101018~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code. Added 3dDTtoDWI tool.
  * Switch build-dependency from lesstif2 to openmotif. Because openmotif is
    non-free AFNI is now a 'contrib' package. This move was necessary,
    because AFNI doesn't play nicely with lesstif (segfaults). Upstream
    doesn't want to support lesstif, because it is currently unmaintained.
  * Added build-dependency x11proto-print-dev to ease backporting to Debian
    lenny.

 -- Michael Hanke <michael.hanke@gmail.com>  Tue, 19 Oct 2010 15:25:53 -0400

afni (0.20101001~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code.
  * Update CMake patch to install new 1dSVAR.R.
  * Load AFNI atlases in addition to the AFNI_GLOBAL_SESSION.

 -- Michael Hanke <michael.hanke@gmail.com>  Sun, 03 Oct 2010 10:51:03 -0400

afni (0.20100928~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code.
  * Update CMake patch to install lib_textdata.py that was missing before.
  * Added netpbm as a recommended package.
  * Added patch to set Debian-specific locations for faces, poems and atlases.

 -- Michael Hanke <michael.hanke@gmail.com>  Wed, 29 Sep 2010 15:26:27 -0400

afni (0.20100917~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code, and updated CMAKE setup.
  * Switched to source package format 3.0 (quilt) and from CDBS to debhelper's
    "dh".

 -- Michael Hanke <michael.hanke@gmail.com>  Tue, 21 Sep 2010 11:51:13 -0400

afni (0.20100114~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code, and updated CMAKE setup.
  * Updated copyright file -- still incomplete.

 -- Michael Hanke <michael.hanke@gmail.com>  Sun, 17 Jan 2010 13:27:49 -0500

afni (0.20091204~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code.
  * Major bugfix caused by multiple, but different, versions of f2c.h --
    causing int to be int32 or int64 for different parts of AFNI, at the same
    time.

 -- Michael Hanke <michael.hanke@gmail.com>  Mon, 07 Dec 2009 20:47:56 -0500

afni (0.20091028~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code.
  * Add patch to allow AFNI to use ffmpeg instead of the stripped mpeg_encode.

 -- Michael Hanke <michael.hanke@gmail.com>  Thu, 29 Oct 2009 14:29:18 -0400

afni (0.20091023~dfsg.1-1) UNRELEASED; urgency=low

  * New upstream code.
  * New CMake buildsystem based on an initial patch by Bernd Feige.
  * New afni-dev package with static libraries and header files for
    AFNI plugin development.
  * Add wrapper to start AFNI's without GUI without having to manually source
    the config file.
  * Add afni.desktop and afni.menu for desktop integration.

 -- Michael Hanke <michael.hanke@gmail.com>  Tue, 27 Oct 2009 09:42:40 -0400

afni (0.20091009~dfsg.1-1) UNRELEASED; urgency=low

  * Initial release (Closes: #409849).

 -- Michael Hanke <michael.hanke@gmail.com>  Sun, 18 Oct 2009 20:43:08 -0400
