Duplicate files
===============
  eispack.h eispack/eispack.h
  coxplot.h coxplot/coxplot.h

Permissions
===========


Additional optional dependencies
================================

Testing
=======
* 3DEdge comes with some basic tests, would be nice to build/execute

* Failed to open plugin /usr/lib/afni/plugins/plug_retroicor.so -- /usr/lib/afni/plugins/plug_retroicor.so: undefined symbol: RIC_CalcVoxelMeans

* Test using crafted and stock AFNI scripts

 - if we get AFNI_data6, we could excercise @DriveAfni simply by
   overloading prompt_user

    echo -e "#\!/bin/sh\nsleep 1\necho 1\n" >| prompt_user; chmod a+x prompt_user
    PATH=$PWD:$PATH @DriveAfni

   the only catch that it also shows a resultant image which needs to
   be closed somehow...

    PATH=$PWD:$PATH @DO.examples also work somewhat...

   actually the ultimate

    > echo -e "#\!/bin/sh\nsleep 1\necho 1\n" >| prompt_user; chmod a+x prompt_user
    > PATH=$PWD:$PATH xvfb-run --auto-servernum --server-num=20 -s "-screen 0 1024x768x24 -ac +extension GLX +render -noreset" @DO.examples 2>&1 | tee output.log

   looks quite promising

    > grep -A2 Error output.log
    Error SUMA_Read_SpecFile: File __donut.spec does not exist or cannot be read.
    --     Error SUMA_IO_args_2_spec (/tmp/buildd/afni-0.20130813~dfsg.1/SUMA/SUMA_Load_Surface_Object.c:5791):
    Failed to read SpecFile
    --     Error Main_SUMA_SurfaceMetrics (/tmp/buildd/afni-0.20130813~dfsg.1/SUMA/SUMA_SurfaceMetrics.c:567):
    No surfaces found.
    ** THD_open_1D(__vec.TriNormSeg.1D): can't open file

   so it is a matter of looking either these are legit and/or
   packaging or my fault of not waiting for user input.

Missing installations
=====================

Incorrect paths
===============

- To READMEs

  > apsearch -view_readme driv 
  ** ERROR: Could not find README files.
  They should have been in directory /usr/bin on your machine
  ** Error: Could not find solid match for readme driv
  Try to pick a good one using apsearch -list_all_afni_readmes

